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TranscriptomicsC. neoformans gene expression in DMEM of WT and rim101 mutant cells
Purpose: To examine the comparative transcriptional profiles of WT and rim101 mutant cells in host-mimicking in vitro conditions to determine genes that are responsible for the increased virulence of the rim101 strain. The rim101 mutant is able to trigger an overactive inflammatory response, presuma...
ORGANISM(S): Cryptococcus neoformans 
2013-02-02 | E-GEOD-43189 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis of the role of Rim101 in the adaptation of Ustilago maydis to an alkaline environment
Alkaline pH triggers an adaptation mechanism in fungi that is mediated by Rim101/PacCp, a zinc finger transcription factor. To identify the genes under its control in Ustilago maydis, we performed microarray analyses, comparing gene expression in a wild type strain vs a rim101/pacC mutant of the fun...
ORGANISM(S): Ustilago maydis 
2014-07-21 | E-GEOD-53341 | biostudies-arrayexpress
GenomicsRNA-SEQ analysis of a C. albicans rim101-/- disrupted strain, a strain overexpressing RIM101 and a reference strain at both alkaline (7.6) and acidic (4) pH
RNA-SEQ analysis of a C. albicans rim101-/- disrupted strain, a strain overexpressing RIM101 and a reference strain at both alkaline (7.6) and acidic (4) pH
PRJNA430363 | ENA
ProteomicsThe contribution of the transcription factors Crz1 and Rim101 to the response to alkalinization in Komagataella phaffii
In the industrially relevant yeast Komagataella phaffii, as in other yeasts, alkalinization of the medium results in fast and extensive transcriptional remodeling. This response has been useful to design novel methanol-free, regulatable platforms for heterologous protein expression. However, its mol...
ORGANISM(S): Komagataella phaffii 
2025-09-02 | PXD064682 | Pride
Lc-ms Crz1 Lfq 
TranscriptomicsWT vs rim101 mutant gene expression under capsule inducing conditions
Cryptococcus neoformans is a prevalent human fungal pathogen that must survive within various tissues in order to establish a human infection. We have identified the C. neoformans Rim101 transcription factor, a highly conserved pH-response regulator in many fungal species. The rim101- mutant strain ...
ORGANISM(S): Cryptococcus neoformans Cryptococcus deneoformans 
2010-09-04 | GSE23929 | GEO
TranscriptomicsC. neoformans gene expression in DMEM of WT and rim101 mutant cells
Purpose: To examine the comparative transcriptional profiles of WT and rim101 mutant cells in host-mimicking in vitro conditions to determine genes that are responsible for the increased virulence of the rim101 strain. The rim101 mutant is able to trigger an overactive inflammatory response, presuma...
ORGANISM(S): Cryptococcus neoformans 
2013-02-02 | GSE43189 | GEO
UnknownInteraction of Cryptococcus neoformans Rim101 and protein kinase A regulates capsule.
Not available
S-EPMC2824755 | biostudies-literature
TranscriptomicsRNA-SEQ analysis of a C. albicans rim101-/- disrupted strain, a strain overexpressing RIM101 and a reference strain at both alkaline (7.6) and acidic (4) pH
The aim of the study was to compare the RNA-SEQ profiles of a wild type C. albicans strain (SC5314), a rim101-/- mutant strain (DAY25) and a strain overexpressing RIM101 (CGY1) at both alkaline (7.6) and acidic (4) pH, in order to identify Rim-dependent genes involved in tolerance to antifungals
ORGANISM(S): Candida albicans 
2018-01-18 | GSE109291 | GEO
GenomicsThe contribution of the transcription factors Crz1 and Rim101 to the response to alkalinization in Komagataella phaffii
The contribution of the transcription factors Crz1 and Rim101 to the response to alkalinization in Komagataella phaffii
PRJNA1262845 | ENA
UnknownThe pH-sensing Rim101 pathway regulates cell size in budding yeast.
Not available
S-EPMC10011510 | biostudies-literature
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