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GenomicsHelicobacter pylori Hp H-3
Helicobacter pylori Hp H-3 Genome sequencing project
PRJNA64145 | ENA
GenomicsHelicobacter pylori Hp P-3
Helicobacter pylori Hp P-3 Genome sequencing project
PRJNA64175 | ENA
TranscriptomicsComparative RNA-Seq of Cupriavidus necator H16, formerly Ralstonia eutropha H16, grown in minimal media with 3-hydroxypropionic acid (3-HP) or fructose as sole carbon source.
3-hydroxypropionic acid (3-HP) is a promising platform chemical with various industrial applications. Several metabolic routes to produce 3-HP from organic substrates such as sugars or glycerol have been implemented in yeast, enterobacterial species and other microorganisms. In this work, we investi...
ORGANISM(S): Cupriavidus necator H16 
2019-03-31 | E-MTAB-7701 | biostudies-arrayexpress
ProteomicsProteomic analyses reveal metabolic responses to 3-hydroxypropionic acid synthesized internally in Synechocystis sp. PCC 6803
Using an engineered 3-HP producing SM strain, in this project, the cellular responses to 3-HP internally produced were first determined using a quantitative iTRAQ-LC-MS/MS proteomics approach. A total of 2,264 unique proteins were identified, which represented about 63% of all predicted protein in S...
ORGANISM(S): Synechococcus cyanophage syn 
2016-09-26 | PXD004974 | Pride
Synechocystis 3-hp Proteomics 
GenomicsComparative RNA-Seq of Cupriavidus necator H16, formerly Ralstonia eutropha H16, grown in minimal media with 3-hydroxypropionic acid (3-HP) or fructose as sole carbon source.
Comparative RNA-Seq of Cupriavidus necator H16, formerly Ralstonia eutropha H16, grown in minimal media with 3-hydroxypropionic acid (3-HP) or fructose as sole carbon source.
PRJEB31322 | ENA
UnknownMetabolic engineering of Komagataella phaffii for enhanced 3-hydroxypropionic acid (3-HP) production from methanol.
Not available
S-EPMC11844118 | biostudies-literature
TranscriptomicsEffect of a High Phosphorus Diet on Hepatic Gene Expressions in Rat
A high phosphorus (HP) diet causes disorders of renal function, bone metabolism, and vascular function. We previously demonstrated that DNA microarray analysis is an appropriate method to comprehensively evaluate the effects of a HP diet on kidney dysfunction such as calcification, fibrillization, a...
ORGANISM(S): Rattus norvegicus 
2016-05-18 | E-GEOD-71201 | biostudies-arrayexpress
TranscriptomicsA novel functional role for the serine protease inhibitor SerpinA3N and its substrate leukocyte elastase in neuropathic pain
Two out-bred rat selection lines were separated to produce different hypersensitivity phenotypes following nerve injury. These lines were termed High Pain and Low Pain (HP or LP). Each sub-strain was either subject to a Sham surgery or a Spinal Nerve Ligation (SNL) surgery to the L4 and L5 spinal ne...
ORGANISM(S): Rattus norvegicus 
2015-02-19 | E-GEOD-63442 | biostudies-arrayexpress
ProteomicsTMT-based proteomics analysis of arachidonic acid (ARA) treated and control oocytes
Arachidonic acid (ARA) treated and control oocytes in 3 replicates were subjected to the 6-plex TMT labeling, HP-RP fractionation, and LC-MS/MS analysis.
ORGANISM(S): Mus musculus (Mouse) 
2022-02-15 | PXD018753 | Pride
Lc-msms Oocytes Mouse Arachidonic acid Mi 
GenomicsMechanism of tolerance improvement of Escherichia coli W against 3-hydroxypropionic acid by deletion of a less characterized transcription factor yieP (ChIP-exo data)
The mechanism of 3-HP tolerance related to YieP was elucidated. The genome-wide analysises were carried out to find out the genes reponsible for 3-HP tolerance.
ORGANISM(S): Escherichia coli K-12 
2022-07-02 | GSE133708 | GEO
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