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ProteomicsQuantitative Profiling of N-linked Glycosylation Machinery in Yeast Saccharomyces cerevisiae
Asparagine-linked glycosylation is a common posttranslational protein modification regulating the structure, stability and function of many proteins. The N-linked glycosylation machinery involves enzymes responsible for the assembly of the lipid-linked oligosaccharide (LLO), which is then transferre...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2017-10-12 | PXD006435 | Pride
Er (endoplasmatic reticulum) ost (oligosaccharyltransferase) glcnac (n-acetyl-glucosamine) llo (lipid-linked oligosaccharide) ms (mass spectrometry) prm (parallel reaction monitoring) silac (stable isotope labelling with amino acids in cell culture) 
ProteomicsAnalysis of Substrate Specificity of Trypanosoma brucei OSTs by Functional Expression in Yeast
N-linked protein glycosylation is an essential and highly conserved post-translational modification in eukaryotes. The transfer of a glycan from a lipid-linked oligosaccharide (LLO) donor to asparagine residues of nascent polypeptide chains is catalyzed by the oligosaccharyltransferase (OST) in the ...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2017-11-03 | PXD007215 | Pride
Lipid linked oligosaccharide specificity Oligosaccharyltransferase N-linked glycosylation Glycosylation occupancy analysis Trypanosoma brucei 
ProteomicsAnalysis of the substrate specificities and reaction kinetics of the yeast oligosaccharyltransferase isoforms
Oligosaccharyltransferase (OST) catalyzes the central step in N-linked protein glycosylation, the transfer of a pre-assembled oligosaccharide from its lipid carrier onto asparagine residues of secretory proteins. The prototypic hetero-octameric OST complex from the yeast Saccharomyces cerevisiae exi...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2021-05-19 | PXD024590 | Pride
Site-occupancy Yeast oligosaccharyltransferase Substract specificity 
TranscriptomicsGene expression analysis of monokaryotic and dikaryotic mycelia from Coprinopsis cinerea
Sexual reproduction is an ancient trait that evolved shortly after the appearance of the first eukaryotic cell. In order to identify the set of genes differentially expressed in monokaryotic and dikaryotic mycelia, the poly(A)-positive transcriptomes of C. cinerea Okayama7 and C. cinerea A43mutB43mu...
ORGANISM(S): Coprinopsis cinerea 
2014-06-01 | E-MTAB-1993 | biostudies-arrayexpress
TranscriptomicsGene expression analysis of stage 1 primordia and vegetative mycelia from Coprinopsis cinerea
Sexual reproduction is an ancient trait that evolved shortly after the appearance of the first eukaryotic cell. In order to study the transcriptional circuitries driving sexual reproduction in basidiomycota, we sequenced the poly(A)-positive transcriptome of stage 1 primordia and vegetative mycelia ...
ORGANISM(S): Coprinopsis cinerea 
2014-06-01 | E-MTAB-1968 | biostudies-arrayexpress
TranscriptomicsCoprinopsis cinerea transcriptome in response to hyphal damage, nematode predation or bacterial co-cultivation
We have recently shown that the coprophilous model mushroom Coprinopsis cinerea transcribes a broad array of genes encoding defense proteins in the vegetative mycelium and fruiting bodies that target bacterial competitors and animal predators challenging the respective tissues of this fungus. In add...
ORGANISM(S): Coprinopsis cinerea 
2015-09-01 | E-MTAB-2763 | biostudies-arrayexpress
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