Age-at-death - OmicsDI

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Unknown (15512)
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Genomics (345)
Proteomics (59)
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Models (1)
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Organisms

Homo sapiens (267)
Mus musculus (226)
Rattus norvegicus (56)
Rattus rattus (25)
Sus scrofa (13)
Arabidopsis thaliana (12)
Macaca mulatta (10)
Canis lupus familiaris (10)
Drosophila melanogaster (9)
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Caenorhabditis elegans (8)
Colinus virginianus (7)
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Saccharomyces cerevisiae (5)
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Boehmeria nivea (2)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (2)
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gamma proteobacterium HTCC2207 (1)
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Chenopodium amaranticolor (1)

Organisms

Homo sapiens (99)
Mus musculus (96)
Rattus norvegicus (10)
Colinus virginianus (7)
Canis lupus familiaris (5)
Drosophila melanogaster (3)
Macaca mulatta (3)
Ovis aries (3)
Danio rerio (3)
Xenopus laevis (2)
Nothobranchius furzeri (2)
Caenorhabditis elegans (2)
Arabidopsis thaliana (2)
mouse gut metagenome (2)
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Saccharomyces cerevisiae W303 (1)
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gut metagenome (1)
human gut metagenome (1)
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soil metagenome (1)

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biostudies-arrayexpress (618)
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pride (36)
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jPOST (2)
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Tissue

Blood serum (3)
Bone (3)
Brain (3)
Iris (3)
Liver (3)
Retina (3)
Bone marrow (2)
Eye (2)
Heart (2)
Tooth enamel (2)
Whole body (2)
Blood plasma (1)
Bone tissue (1)
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Thompson grade 3 (1)
Hutchinson Gilford Progeria Syndrome (1)
Nevus (1)
Melanoma (1)
Neuroblastoma (1)
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Multiple Sclerosis (1)
Malignant neoplasm of bronchus and lung (1)
Bowel Cancer (1)
Colorectal Cancer (1)
Neoplasms (1)
Alpha 1-antitrypsin deficiency (1)
Bone osteosarcoma (1)
COVID-19 (1)
Cardiovascular system disease (1)
Chronic kidney disease (1)
Disease free (1)
Glaucoma (1)
Huntington Disease (1)
Hydrocephalus (1)
Macular degeneration (1)
Retinitis pigmentosa (1)

Technology Type

Mass Spectrometry (36)
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Mass spectrometry (8)
Bottom-up proteomics (8)
Mass spectrometry assay (5)
NMR spectroscopy (3)
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Gel-based experiment (3)
All-ion fragmentation (2)
Data-independent acquisition (2)
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NMR spectroscopy assay (1)
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SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (6)
NextSeq 500 (4)
Q Exactive (4)
Illumina NovaSeq 6000 (2)
Orbitrap Exploris 480 (2)
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CytoFLEX SRT Benchtop Cell Sorter (1)
Sony SH800S Cell Sorter (1)
Microbeads (1)
GeneChip Instrument System (1)
Affymetrix mouse gene 1.0 ST arrays (1)
Ilumina HiScan H166 (1)
IScan Illumina (1)
PacBio RS II (1)
Intel Xeon E5-2660 (128G RAM) (1)
Illumina iScan (1)
Agilent 2100 Bioanalyzer (1)
GenePix Personal 4100A [Axon Instruments] (1)
418 [Affymetrix] (1)
Ion Torrent Proton (1)
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NextSeq 550 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
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LTQ Orbitrap Velos (1)
MALDI Synapt G2-S HDMS (1)
Orbitrap Fusion (1)
Synapt G2-S HDMS (1)

Publication Date

2010 (82)
2015 (80)
2014 (79)
2012 (76)
2011 (64)
2013 (60)
2005 (50)
2008 (41)
2016 (33)
2007 (30)
2009 (26)
2026 (23)
2025 (23)
2022 (23)
2023 (18)
2021 (15)
2020 (14)
2024 (12)
2018 (12)
2017 (12)
2006 (12)
2019 (8)
2004 (4)
2003 (1)

UNIPROT ID/AC

P28562 (1)
P45983 (1)
Q00613 (1)
Q9UNE7 (1)
Q16539 (1)
P31749 (1)

CHEBI ID

CHEBI:18237 (5)
CHEBI:27570 (5)
CHEBI:18186 (5)
CHEBI:16811 (5)
CHEBI:17234 (5)
CHEBI:28300 (5)
CHEBI:24898 (5)
CHEBI:25017 (5)
CHEBI:15428 (5)
CHEBI:28044 (5)
CHEBI:27266 (5)
CHEBI:16449 (5)
CHEBI:78320 (5)
CHEBI:16737 (5)
CHEBI:16919 (5)
CHEBI:30769 (5)
CHEBI:60645 (4)
CHEBI:17822 (4)
CHEBI:25094 (4)
CHEBI:37684 (4)
CHEBI:26986 (4)
CHEBI:18257 (4)
CHEBI:17754 (4)
CHEBI:17268 (4)
CHEBI:16010 (4)
CHEBI:17750 (4)
CHEBI:26523 (1)
CHEBI:36080 (1)
CHEBI:15422 (1)
CHEBI:16761 (1)

Metabolite Name

Creatine (5)
Histidine (4)
Leucine (4)
Valine (4)
Serine (4)
Alanine (4)
Phenylalanine (4)
Tryptophan (4)
Glycohyodeoxycholic acid (3)
Methylphosphate (3)
N1-Methyl-2-pyridone-5-carboxamide (3)
Glycodeoxycholic acid (3)
Glutamate (3)
EDTA (3)
Ketoleucine (3)
Glycine (3)
Proline (3)
Glutamate (3)
AMP (3)
Histidine (3)
Phenylalanine (3)
Tyrosine (3)
Mannose (3)
Methionine (3)
Glucose (3)
Creatinine (3)
Creatine (3)
Glutamine (3)
Citrate (3)
Alanine (3)

First Public Date

2014 (60)
2025 (36)
2022 (33)
2024 (30)
2023 (25)
2026 (22)
2021 (21)
2020 (19)
2017 (11)
2015 (11)
2019 (10)
2018 (9)
2013 (8)
2016 (5)

Modelling Approach

Ordinary differential equation model (1)

Study status

Completed (8)
Not provided (2)
Enrolling by invitation (1)
Terminated (1)
Not yet recruiting (1)
Recruiting (1)

Lab affiliation

Wilmer Eye Institute, Smith Building, M015, 400 N. Broadway, Baltimore, MD 21287 (2)
1Department of Ophthalmology, Johns Hopkins University School of Medicine, Baltimore, MD (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH, Utrecht, The Netherlands and Netherlands Proteomics Center, Padualaan 8, 3584 CH, Utrecht, The Netherlands (1)
Department of Biological Sciences, Graduate School of Science, the Uni- versity of Tokyo, 7–3–1 Hongo, Bunkyo-ku, Tokyo 113–0033, Japan. (1)
Department of Genome Sciences, University of Washington, Seattle, WA, USA (1)
Department of Infectious Diseases, Immunology and Sexual Health and Department of Medicine, St George Hospital, University of New South Wales, 2 South Street, Kogarah, Sydney, NSW 2217, Australia (1)
Department of Medicine III and IZKF, University Hospital Aachen, Aachen, Germany (1)
Department of Neurosurgery and Institute for NeurosciencesUniversity Hospital of Toulouse, Toulouse, France. Toulouse NeuroImaging Center (ToNIC), University of Toulouse, INSERM, UPS, Toulouse, France. (1)
Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA (1)
Department of Ophthalmology, Johns Hopkins University School of Medicine (1)
Department of Ophthalmology, Johns Hopkins University School of Medicine, Baltimore, MD (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Département de Neurochirurgie, CHU Angers, Angers, France Inserm UMR 1307, CNRS UMR 6075, Université de Nantes, CRCI2NA, Université d'Angers, Angers, France (1)
Evotec (Munchen) GmbH, Am Klopferspitz 19a, 82152 Martinsried, Germany (1)
Faillace Department of Psychiatry and Behavioral Sciences University of Texas Health Science Center at Houston (1)
Forensic Science Research Group, Faculty of Health and Life Sciences, Applied Sciences, Northumbria University, NE1 8ST, Newcastle Upon Tyne, UK (1)
Heart Institute, Cedars-Sinai Medical Center (1)
INRAE Centre Val de Loire UMR Physiologie de la Reproduction et des Comportements UMR INRAE 85-CNRS 7247-Université de Tours -IFCE 37380 Nouzilly France (1)
Institute of Clinical Medicine, Department of Clinical Molecular Biology, University of Oslo, Norway (1)
Key Laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, China. (1)
King's British Heart Foundation Centre, King's College London, UK (1)
National Key Laboratory of Medical Molecular Biology and Department of Immunology; Institute of Basic Medical Sciences; School of Basic Medicine; Peking Union Medical College (1)
PRBB, Institute of Evolutionary Biology (UPF-CSIC), Dr. Aiguader 88, 8003 Barcelona, Spain Catalan Institution of Research and Advanced Studies (ICREA), Passeig de Lluís Companys, 23, 08010, Barcelona, Spain Centro Nacional de Análisis Genómico (CNAG), Baldiri i Reixac 4, 08028 Barcelona, Spain Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona Edifici ICTA-ICP, c/ Columnes s/n, 08193 Cerdanyola del Vallès, Barcelona, Spain (1)
ProGenTomics, Laboratory of Pharmaceutical Biotechnology, Faculty of Pharmaceutical Sciences, Ghent University, Belgium. (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore 575018, India. (1)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (1)
Research Unit Protein Science, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Neuherberg, Germany (1)
Section for Evolutionary Genomics, The GLOBE Institute, University of Copenhagen, Denmark (1)
Target Discovery Institute Discovery Proteomics Facility (1)
The Forensic Science Unit, Faculty of Health and Life Sciences, Ellison Building, Northumbria University, Newcastle Upon Tyne, UK (1)

Keyword

Health-economy (1)
Industry (1)
Incidence (1)
Large (>1 cm) adenomas (1)
Genetic (1)
Epidemiology (1)
Mass Screening (1)
Health Services Research (1)
Comparative Effectiveness Research (1)
Mortality (1)
Colorectal (1)
Comorbidity (1)
Screening (1)
Irinotecan (1)
Capecitabine (1)
Oxaliplatin (1)

IsPrivate

False (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (451)
RNA-seq of coding RNA (72)
RNA-seq of non coding RNA (21)
Comparative genomic hybridization by array (14)
Unknown experiment type (12)
Methylation profiling by array (12)
ChIP-seq (9)
Interventional (9)
Transcription profiling by SAGE (5)
Transcription profiling by tiling array (4)
Observational (4)
Genotyping by array (3)
Other (3)
ChIP-chip by tiling array (2)
DNA-seq (2)
Proteomic profiling by array (2)
Animal - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
RNAi profiling by array (1)
MicroRNA profiling by high throughput sequencing (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
Observational patient registry (1)

Release Date

2022 (2284)
2021 (2057)
2023 (1928)
2025 (1700)
2024 (1607)
2020 (1443)
2019 (963)
2018 (800)
2017 (612)
2016 (535)
2015 (424)
2014 (384)
2013 (267)
2012 (222)
2026 (212)
2011 (181)
2010 (160)
2008 (90)
2009 (84)
2005 (58)
2007 (53)
2006 (26)
2004 (13)
2002 (7)
2001 (7)
2003 (6)
2000 (4)
1999 (2)
1994 (1)

Location

United States (4)
United Kingdom (2)
Germany (1)
Australia (1)
Switzerland (1)

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DNA methylation-based profiling of archaeological horse remains for age-at-death and castration

Epigenetic prediction of age-at-death and castration in ancient horses

PRJEB56293 | ENA

Proctor2011_ProteinHomeostasis_NormalCondition

This model is from the article: Modelling the Role of the Hsp70/Hsp90 System in the Maintenance of Protein Homeostasis Proctor CJ, Lorimer IAJ PLoS ONE2011; 6(7): e22038. doi:10.1371/journal.pone.0022038, Abstract: Neurodegeneration is a...

2024-09-02 | BIOMD0000000344 | BioModels

Insights on the Differential Preservation of Bone Proteomes in Inhumated and Entombed Cadavers from Italian Forensic Caseworks

Bone is a long-lasting biological tissue often used in forensic investigations as it retains vital biomolecular information commonly used for identification purposes. Bone proteins have attracted interest for their potential in estimating post-mortem interval (PMI) and age-at-death (AAD). However, t...

ORGANISM(S): Homo sapiens (Human)

2022-03-25 | PXD029911 | Pride