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ProteomicsProximity proteomics using AMPL-MS
Eukaryotic chromatin is organised in individual domains, which are defined by their location within the nuclear space and their distinct proteomic compositions. In contrast to cellular organelles surrounded by lipid membranes, the composition of distinct chromatin domains is rather ill described and...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2024-05-29 | PXD044295 | Pride
Proximity proteomics using ampl-ms 
UnknownAMPL: A Data-Driven Modeling Pipeline for Drug Discovery.
Not available
S-EPMC7189366 | biostudies-literature
ProteomicsProximity proteomics using AMPL-MS coupled to analysis for histone modification
Eukaryotic chromatin is organised in individual domains, which are defined by their location within the nuclear space and their distinct proteomic compositions. In contrast to cellular organelles surrounded by lipid membranes, the composition of distinct chromatin domains is rather ill described and...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2024-05-29 | PXD044296 | Pride
Histone modification Centromere Protein a-apex2 X-chromosome Biotinylation Chromatin Proximity proteomics 
ProteomicsLow cell number proteomic analysis using in-cell protease digests reveals a robust signature for cell cycle state classification
Comprehensive proteome analysis of rare cell phenotypes remains a significant challenge. We report a method for low cell number mass spectrometry (MS)-based proteomics using protease digestion of mildly formaldehyde-fixed cells in cellulo, which we call the ‘in-cell digest’. We combined this with AM...
ORGANISM(S): Homo sapiens (Human) 
2021-11-25 | PXD028117 | Pride
Tk6 In-cell digest Ampl Cell cycle Human 
UnknownThe role of RNA in the maintenance of chromatin domains as revealed by antibody-mediated proximity labelling coupled to mass spectrometry.
Not available
S-EPMC11147508 | biostudies-literature
UnknownIdentification by Molecular Docking ofHomoisoflavones from Leopoldia comosa as Ligands of Estrogen Receptors.
Not available
S-EPMC6017050 | biostudies-literature
UnknownIdentification of modules and key genes associated with breast cancer subtypes through network analysis.
Not available
S-EPMC11137066 | biostudies-literature
UnknownComparison of the Abbott Alinity m and Qiagen Artus assays for the quantification of BK virus in clinical samples.
Not available
S-EPMC11745809 | biostudies-literature
UnknownUnderlying Resistance Mechanisms in the Cynosurus echinatus Biotype to Acetyl CoA Carboxylase-Inhibiting Herbicides.
Not available
S-EPMC4826872 | biostudies-literature
UnknownCharacterization and Expression Analysis of Four Cadmium-Tolerance-Associated Genes of Avicennia marina (Forsk.).
Not available
S-EPMC9952839 | biostudies-literature
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