Anaerobic consortium

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Unknown (199)
Genomics (110)
Transcriptomics (25)
Proteomics (14)
Metabolomics (9)

Organisms

Schizosaccharomyces pombe (11)
Sinorhizobium meliloti BL225C (11)
Sus scrofa domesticus (11)
Saccharomyces cerevisiae (11)
Staphylococcus aureus (11)
Rattus norvegicus (11)
Escherichia coli (11)
Methylohalobius crimeensis 10Ki (11)
Homo sapiens (11)
Shigella flexneri (11)
Allexis (11)
Shigella (11)
Zea mays (11)
Meleagris gallopavo (11)
Medicago truncatula (11)
Pseudomonas fluorescens WH6 (11)
Listeria monocytogenes (11)
Homo sapiens (8)
Mus musculus (4)
Saccharomyces cerevisiae (3)
Zea mays (2)
environmental samples (2)
mixed culture KAZ_0815 (1)
Thermotoga maritima MSB8 (1)
Osmerus mordax (1)
Dehalobacter restrictus (1)
Escherichia coli K-12 (1)
Pseudomonas aeruginosa (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)

Organisms

anaerobic digester metagenome (12)
bioreactor metagenome (8)
Dehalobacterium formicoaceticum (2)
Chlorobium chlorochromatii (1)
dechlorinating enrichment culture (1)
electrolysis cell metagenome (1)
salt lake metagenome (1)
aquaculture metagenome (1)
algae metagenome (1)
mixed culture metagenome (1)
feces metagenome (1)
groundwater metagenome (1)
rat gut metagenome (1)
sludge metagenome (1)
fermentation metagenome (1)
compost metagenome (1)
sediment metagenome (1)
activated sludge metagenome (1)
soil metagenome (1)
Homo sapiens (1)

Repository

ENA (110)
biostudies-arrayexpress (24)
pride (11)
MetaboLights (5)
GNPS (4)
iProX (2)
geo (1)
MassIVE (1)

Tissue

Enrichment culture (1)

Technology Type

Mass Spectrometry (11)
Shotgun proteomics (6)
Mass spectrometry (4)
Bottom-up proteomics (4)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Metaproteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)

Instrument Platform

Orbitrap Exploris 120 (4)
MoFlo XDP (Beckman Coulter) or a FACSAria II (Becton Dickinson) (1)
Fluidigm C1 autoprep system (1)
Illumina HiSeq 2500 (1)
Q Exactive HF-X (1)
LTQ FT Ultra (Thermo Scientific) (1)
Bruker (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Q Exactive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2022 (8)
2010 (6)
2016 (5)
2012 (5)
2013 (3)
2026 (3)
2025 (3)
2024 (3)
2011 (2)
2017 (1)
2015 (1)
2014 (1)
2009 (1)
2008 (1)
2007 (1)
2023 (1)
2021 (1)
2020 (1)
2019 (1)

CHEBI ID

CHEBI:27897 (3)
CHEBI:43355 (3)
CHEBI:16027 (3)
CHEBI:15891 (3)
CHEBI:132966 (2)
CHEBI:43580 (2)
CHEBI:40410 (2)
CHEBI:35704 (2)
CHEBI:16031 (2)
CHEBI:60175 (2)
CHEBI:10072 (2)
CHEBI:17620 (2)
CHEBI:9349 (2)
CHEBI:18344 (2)
CHEBI:17597 (2)
CHEBI:28478 (2)
CHEBI:18261 (2)
CHEBI:15698 (2)
CHEBI:17775 (2)
CHEBI:17126 (2)
CHEBI:17750 (2)
CHEBI:6650 (2)
CHEBI:26806 (2)
CHEBI:78320 (2)
CHEBI:25017 (2)
CHEBI:35932 (2)
CHEBI:24898 (2)
CHEBI:16974 (2)
CHEBI:18237 (2)
CHEBI:18211 (2)

Metabolite Name

Tryptophan (2)
CMP (2)
N('1)-acetylspermidine (1)
Iodide* (1)
Xanthurenic_acid (1)
Quinolinic_acid (1)
Picolinic_acid (1)
N-acetylserotonine (1)
Kynurenic_acid (1)
Indoxyl-3-Sulfate (1)
Indole-3-lactic_acid (1)
Indole-3-acetic_acid (1)
Indole_Propionic_acid (1)
5-Hydroxytryptophane (1)
5-Hydroxyindole_acetic_acid (1)
3-OH-kynurenine (1)
3-OH-anthranilic_acid (1)
Indole-3-aldehyde (1)
Histidylalanine (1)
N(1)-acetylspermine (1)
3-ketosphinganine (1)
Metronidazole (1)
Tryptophol (1)
N1,N12-diacetylspermine (1)
2,3-diphosphoglycerate (1)
Glucosamine-6-phosphate (1)
Adenosine 3',5'-diphosphate (1)
Ribose 5-phosphate (1)
Phenol red (1)
O-Propanoylcarnitine (1)

First Public Date

2026 (24)
2023 (13)
2025 (11)
2019 (10)
2024 (9)
2021 (9)
2020 (9)
2017 (6)
2016 (6)
2022 (4)
2015 (4)
2018 (2)
2014 (2)
2013 (1)

Study type

Transcription profiling by array (18)
RNA-seq of coding RNA (2)
Unknown experiment type (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2018 (22)
2024 (18)
2025 (16)
2021 (15)
2020 (15)
2019 (15)
2023 (14)
2017 (13)
2016 (12)
2015 (10)
2014 (9)
2022 (9)
2013 (8)
2012 (8)
2011 (8)
2010 (7)
2008 (6)
2007 (4)
2009 (3)
2005 (2)
2003 (2)
2000 (2)
2026 (1)
2004 (1)
2002 (1)
2001 (1)
1999 (1)

Lab affiliation

Faculty of Biosciences, NMBU-Norwegian University of Life Sciences, Post Office Box 5003 1432, Ås Norway (1)
Head of Center for Microbial Communities Department of Chemistry and Bioscience Aalborg University Fredrik Bajers Vej 7H 9220 Aalborg Denmark (1)
Universidade de Sorocaba - Sorocaba, São Paulo, Brazil (1)
The University of Queensland, Australia (1)
Otto von Guericke University Magdeburg (1)
Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, 28359, Bremen, Germany (1)
Proteomics Core, DTU Bioengineering, Technical University of Denmark (DTU), Lyngby, Denmark (1)
Faculty of Biotechnology, Chemistry and Food Science, NMBU - Norwegian University of Life Sciences, Norway (1)
University of Konstanz (1)
Norwegian University of Life Sciences (1)
Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Prague, Czech Republic ORCID logohttp://orcid.org/0000-0001-6976-8446 (1)

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Metaproteomic analysis of an enriched anaerobic rumen consortium (ERAC)

Metaproteomic analysis of an enriched anaerobic rumen consortium (ERAC) using sugarcane bagasse and rumen as unique carbon and microbial sources

ORGANISM(S): metagenomes

2020-07-15 | PXD019219 | Pride

Metaproteome Anaerobic consortium

Algae-bacterial consortium in anaerobic digestate

Algae-bacterial consortium in anaerobic digestate Targeted loci environmental

PRJNA756741 | ENA

anaerobic digester metagenome

anaerobic digester metagenome Metagenome

PRJNA411779 | ENA

anaerobic digester metagenome

Microbial consortium Metagenome

PRJNA314006 | ENA

Next Generation Metatranscriptome Sequencing of an Anaerobic Hexadecane-Degrading Microbial Consortia

Purpose: Identification of transcriptionally active genes in the unculturable community constituent, Smithella, during hexadecane degradation; Differential gene expression analysis of hexadecane-relevant genes acoss three different conditions; Extension of metatranscriptomic datasets to other commun...

ORGANISM(S): mixed culture KAZ_0815

2013-10-29 | E-GEOD-49830 | biostudies-arrayexpress

Nitrate-dependent anaerobic propane and butane oxidation coupled to anaerobic ammonium oxidation

ORGANISM(S): environmental samples <firmicutes

2024-05-24 | PXD039266 | Pride

Anammox. Propane Nitrate

Definition of the Pseudomonas aeruginosa Anr and Dnr Regulons

The anaerobic metabolism of the opportunistic pathogen Pseudomonas aeruginosa is important for growth and survival during persistent infections. The two Fnr-type transcription factors Anr and Dnr regulate different parts of the underlying network. Both are proposed to bind to a non-distinguishable D...

ORGANISM(S): Pseudomonas aeruginosa

2010-07-07 | E-GEOD-17179 | biostudies-arrayexpress

Anaerobic BTEX biodegradation consortium

PRJNA1302032 | ENA

N2O-reducing population in anaerobic digestate for next-generation biorest

Anaerobic digestion (AD) is a core technology in management of urban organic wastes, converting a fraction of the organic carbon to methane and the residual digestate, the biorest, have a great potential to become a major organic fertilizer for agricultural soils in the future. At the same time, mit...

ORGANISM(S): prokaryotic environmental samples

2022-02-16 | PXD022030 | Pride

Lc-msms N2o-reduction Biorest Anaerobic digestion

sulfate-reducing bacteria consortium

a sulfate-reducing bacteria consortium

PRJNA607572 | ENA

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