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GenomicsThe Danish Reference Genome - GenomeDenmark data access committee
Data Access Committee EGAC00001000562
EGAC00001000562 | EGA
TranscriptomicsMolecular architecture of transcription factor hotspots in early adipogenesis
Here, we have used digital genomic footprinting to precisely define protein localization for several adipogenic transcription factors at a genome-wide level. In combination with ChIP-seq data, these analyses reveal novel molecular insight into the organization of transcription factors at hotpot regi...
ORGANISM(S): Mus musculus 
2014-05-08 | E-GEOD-57415 | biostudies-arrayexpress
ProteomicsTreatment with Cefotaxime Affects Expression of Conjugation Associated Proteins and Conjugation Transfer Frequency of an IncI1 Plasmid in Escherichia coli
Horizontal gene transfer (HGT) is the major mechanism responsible for spread of antibiotic resistance. Antibiotic treatment has been suggested to promote HGT, either by directly affecting the conjugation process itself or by selecting for conjugations subsequent to DNA transfer. However, recent rese...
ORGANISM(S): Escherichia coli 
2017-11-21 | PXD006679 | Pride
Antibiotics Proteomics Escherichia coli Itraq 
UnknownGlobal mRNA sequencing of human skeletal muscle: Search for novel exercise-regulated myokines.
Not available
S-EPMC5369209 | biostudies-literature
UnknownEffect of dexamethasone as an analgesic adjuvant to multimodal pain treatment after total knee arthroplasty: randomised clinical trial.
Not available
S-EPMC8724786 | biostudies-literature
UnknownCD28 Co-Stimulus Achieves Superior CAR T Cell Effector Function against Solid Tumors Than 4-1BB Co-Stimulus.
Not available
S-EPMC7958604 | biostudies-literature
UnknownExercise in vivo marks human myotubes in vitro: Training-induced increase in lipid metabolism.
Not available
S-EPMC5389842 | biostudies-literature
Genomicsena-DATASET-DTU-19-07-2017-19:09:46:884-206 - samples
The MHC vcf call set was generated using a modified AsmVar and BayesTyper pipeline. In contrast to the original pipeline, where variant calling is performed using alignment of collapsed assemblies to a reference genome, the MHC call set was produced using alignment of phased MHC haplotypes. Two iter...
EGAD00001003455 | EGA
Genomicsena-DATASET-DTU-20-02-2017-20:47:48:841-649 - samples
Variants on the Y chromosome for 62 danish males in VCF format from the GenomeDenmark Phase 2 cohort. Variants were called using reference based approaches such as the haplotype-caller module from GATK and using alignment of denovo assemblies to the reference using ASMvar.
EGAD00001003186 | EGA
Genomicsena-DATASET-DTU-01-02-2017-10:47:25:397-764 - samples
Alignment of Genome Denmark Phase II dataset to GRCh38. The dataset consists of 150 Danish individuals (50 trios) sequenced to 80X. The BAM-file contains data from multiple libraries created from one individual with libraries of 180, 500, 800, 2000, 5000, 10000 and 20000 bp. The libraries were creat...
EGAD00001003157 | EGA
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