Andersen B B - OmicsDI

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Unknown (2007)
Transcriptomics (181)
Proteomics (119)
Genomics (31)
Metabolomics (10)
Multiomics (2)
Genomic (1)
Clinical (1)

Organisms

Homo sapiens (113)
Mycobacterium tuberculosis SP7 (108)
Mycobacterium tuberculosis SP10 (108)
Mycobacterium tuberculosis SP13 (108)
Mycobacterium tuberculosis SP22 (108)
Chlamydomonas reinhardtii (108)
Mus musculus (46)
Arabidopsis thaliana (13)
Myxococcus xanthus (6)
Aspergillus oryzae (3)
mixed sample (3)
Saccharomyces cerevisiae (3)
Rattus norvegicus (3)
Aspergillus niger (2)
Drosophila melanogaster (2)
Danio rerio (2)
Bifidobacterium animalis subsp. lactis (1)
Dehalococcoides sp. ANAS2 (1)
Dehalococcoides (1)
environmental samples (1)
Lactobacillus acidophilus NCFM (1)
Pimephales promelas (1)
Dehalobacter restrictus (1)
Aspergillus oryzae RIB40 (1)
Macaca mulatta (1)
Listeria monocytogenes (1)
Oncorhynchus mykiss (1)
Bos taurus (1)
Caenorhabditis elegans (1)
Sus scrofa (1)

Repository

biostudies-arrayexpress (190)
pride (108)
EGA (24)
MassIVE (9)
MetaboLights (9)
dbGaP (1)
GNPS (1)
jPOST (1)

Tissue

Cell culture (16)
Epithelial cell (11)
Brain (7)
Skin (6)
Blood serum (5)
Permanent cell line cell (5)
Colon (5)
Macrophage (4)
Whole body (4)
Liver (4)
Colonic mucosa (3)
Colon sigmoideum (3)
Melanocyte (3)
Plant cell (3)
Blood plasma (3)
Fibroblast (3)
Rumen (2)
Prostate adenocarcinoma cell (2)
Follicular fluid (2)
Venom (2)
Keratinocyte (2)
Blood platelet (2)
Bone marrow (2)
Skeletal muscle (2)
Dendritic cell (2)
Testis (2)
Leaf (2)
Kidney (2)
Saliva (2)
Neutrophil (2)

Disease

Colon cancer (11)
Disease free (8)
Breast cancer (4)
Female reproductive system (2)
Septic shock (2)
Prostate cancer (2)
Malignant neoplasm of ovary (2)
Bladder carcinoma (1)
Patients with LF syndrome and SOS of stage II active disease (1)
Diabetes Mellitus (1)
Complex partial epilepsy (1)
B-cell adult acute lymphocytic leukemia (1)
Eczema (1)
Ciliopathy (1)
Psoriasis (1)
Barth syndrome (1)
Polymyalgia rheumatica (1)
Bacterial infectious disease (1)
Cutaneous malignant melanoma 1 (1)
Irritable bowel syndrome (1)
Prostate adenocarcinoma (1)
Liver disease (1)
Cholangiocarcinoma (1)
Melanoma (1)
Parkinson's disease (1)
Colorectal cancer (1)
Alzheimer's disease (1)
Tuberculosis (1)
Bacterial sepsis (1)
Ulcerative colitis (1)

Technology Type

Mass Spectrometry (108)
Shotgun proteomics (57)
Bottom-up proteomics (27)
Data-dependent acquisition (17)
Mass spectrometry (8)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-independent acquisition (7)
Gel-based experiment (5)
Glycoproteomics (2)
DiaPASEF (2)
ION_TORRENT, Ion Torrent Proton (1)
Illumina HiSeq 2500, ILLUMINA, Illumina MiSeq (1)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
MSE (1)
HDMSE (1)
SWATH MS (1)
SRM/MRM (1)
Top-down proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Q Exactive (8)
NextSeq 500 (5)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 2000 (3)
Liquid Chromatography MS - negative - reverse phase (3)
Illumina HiSeq 1500 (2)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 3000 (2)
Q Exactive HF (2)
Gas Chromatography MS - (2)
MA900, Sony (1)
10x Chromium Controller (1)
Agilent DNA Microarray Scanner (1)
Illumina Genome Analyzer IIx (1)
Illumina NovaSeq X (1)
LTQ Orbitrap Elite (1)
LCMS-IT-TOF (Shimadzu) (1)
Liquid Chromatography MS – negative - reverse phase (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
MS Imaging - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
ESI-ION-TRAP (1)

Publication Date

2012 (40)
2025 (26)
2013 (22)
2016 (19)
2015 (19)
2014 (18)
2010 (18)
2021 (17)
2011 (17)
2024 (17)
2023 (16)
2022 (14)
2008 (11)
2026 (10)
2009 (10)
2020 (9)
2019 (8)
2018 (8)
2007 (8)
2017 (8)
2005 (1)
2004 (1)

CHEBI ID

CHEBI:17368 (3)
CHEBI:17327 (2)
CHEBI:22470 (2)
CHEBI:16691 (2)
CHEBI:28822 (2)
CHEBI:17992 (2)
CHEBI:17319 (2)
CHEBI:26271 (2)
CHEBI:16040 (2)
CHEBI:17126 (2)
CHEBI:22660 (2)
CHEBI:22653 (2)
CHEBI:27570 (2)
CHEBI:18186 (2)
CHEBI:26986 (2)
CHEBI:16811 (2)
CHEBI:28300 (2)
CHEBI:70744 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:28842 (2)
CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:28044 (2)
CHEBI:16865 (2)
CHEBI:17780 (2)
CHEBI:30763 (2)
CHEBI:16235 (2)
CHEBI:17568 (2)
CHEBI:27266 (2)

Metabolite Name

Phytol (2)
Aspartic acid (2)
Glycine (2)
Stearic acid (2)
Glycylproline (2)
Succinate (2)
Palmitic acid (2)
Arachidic acid (2)
Hypoxanthine (2)
Clerodane (1)
Kolavenyl diphosphate (1)
Ent-copalyl diphosphate (1)
Callicarpenal (1)
Miltiradiene (1)
Calliterpenone (1)
Gibberellic acid (1)
(+)-copalyl diphosphate (1)
GPCho(18:0/0:0) (1)
GPCho(16:0/0:0) (1)
15-oxo prostaglandin F2alpha (1)
3'-deoxyguanosine (1)
3,3-dimethyl-2-oxobutanoic acid (1)
Phosphoglyceric acid (1)
2-deoxyguanosine (1)
N-acetyl glutamic acid (1)
TG(18:2(9Z,12Z)/20:0/20:1(11Z))[iso6] (1)
TG(18:1(9Z)/18:1(9Z)/18:2(9Z,12Z))[iso3] (1)
TG(18:0/18:1(9Z)/18:2(9Z,12Z))[iso6] (1)
TG(18:0/18:1(9Z)/18:1(9Z))[iso3] (1)
TG(18:0/18:0/20:4(5Z,8Z,11Z,14Z))[iso3] (1)

Modification

Not available (1)

Study status

Recruiting (1)

Study type

Transcription profiling by array (129)
Methylation profiling by array (8)
Comparative genomic hybridization by array (7)
ChIP-seq (6)
RNA-seq of coding RNA (6)
Other (5)
RNA-seq of coding RNA from single cells (5)
ChIP-chip by tiling array (4)
RNA-seq of total RNA (3)
Transcription profiling by tiling array (2)
Genotyping by array (2)
Transcription profiling by RT-PCR (2)
Baseline (1)
MicroRNA profiling by high-throughput sequencing (1)
Plant - High-throughput sequencing (1)
High-throughput sequencing (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
CLIP-seq (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)
Observational (1)

Release Date

2022 (215)
2021 (215)
2023 (200)
2024 (193)
2025 (192)
2020 (174)
2018 (122)
2016 (121)
2019 (117)
2017 (98)
2012 (89)
2015 (79)
2014 (78)
2013 (64)
2011 (56)
2010 (54)
2009 (34)
2008 (25)
2026 (20)
2007 (19)
2006 (10)
2003 (6)
2004 (4)
2002 (4)
1998 (3)
2005 (2)
2001 (1)
1999 (1)

Lab affiliation

Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (4)
1School of Natural Sciences, Macquarie University, Sydney, NSW, Australia 2Institute for Glyco-core Research (iGCORE), Nagoya University, Aichi, Japan (3)
EPFL (3)
Department of Chemistry & Bioscience Aalborg University Denmark (2)
Clinical Chemistry, Department of Translational Medicine, Lund University, Skane University Hospital Malmö, 205 02 Malmö, Sweden. (2)
School of Natural Sciences, Macquarie University, Sydney, Australia (2)
Anders H. Lund Professor, PhD Biotech Research and Innovation Centre University of Copenhagen Ole Maaloes Vej 5 DK-2200 N Copenhagen Denmark (1)
Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia; Biomolecular Discovery Research Centre, Macquarie University, Sydney, NSW, Australia (1)
1. School of Natural Sciences, Macquarie University, Sydney, NSW 2109, Australia 2. Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, Japan (1)
Novo Nordisk Foundation (NNF) Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark Department of Dermatology and Allergy, Copenhagen University Hospital - Herlev and Gentofte Hospital, Hellerup, Denmark Leo Foundation Skin Immunology Research Center, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark (1)
University of Southern Denmark, Department og Biochemistry and Molecular Biology (1)
Institut of Biochemistry and Molecular Biology, University of Southern Denmark (1)
Department of Cell and Regenerative Biology, University ofWisconsin-Madison, Madison, Wisconsin, 53705, USA (1)
Professor, Biochemistry and Molecular Biology, University of British Columbia, UBC (1)
INCLIVA Biomedical Research Institute (1)
Laboratory for Medical Massspectroemtry Aalborg University (1)
Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Germany (1)
Center for Addiction Research Department of Pharmacology and Toxicology The University of Texas Medical Branch Galveston, TX 77555 (1)
Department of Chemistry and Biomolecular Sciences Macquarie University Sydney, NSW 2109 Australia (1)
Associate Professor of Oncological Sciences Huntsman Cancer Institute at the University of Utah (1)
CEO of GlyProVac LLC (1)
UMR 117 CIRAD-INRA ASTRE Montpellier, France (1)
1. School of Natural Sciences, Macquarie University, Sydney, New South Wales, Australia 2. Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, Japan (1)
Dept. Proteomics and Signal Transduction Max Planck Institute of Biochemistry Am Klopferspitz 18 82152 Martinsried (near Munich) Germany (1)
University of Maryland Center for Environmental Science -- Institute of Marine and Environmental Technology, University of Maryland, Baltimore County (1)
Instituto de Ciências Biomédicas, Departamento de Parasitologia, Universidade de São Paulo, USP, São Paulo, Brazil. (1)
School of Natural Sciences, Macquarie University, Sydney, Australia Biomolecular Discovery Research Centre, Macquarie University, Sydney, Australia Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, 464-8601, Japan (1)
Senior Forsker Institutt for klinisk og molekylær medisin Laboratoriesenteret, 231.05.032, Øya, Erling Skjalgssons g 1 Department of Cancer Research and Molecular Medicine, NTNU, Norway. (1)
University of Maryland Center for Environmental Science -- Institute of Marine and Environmental Technology and University of Maryland, Baltimore County, United States (1)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås, Norway (1)

Location

Belgium (1)

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Biochemically validated structural model of the 15-subunit intraflagellar transport complex IFT-B

Cilia are ubiquitous eukaryotic organelles impotant for cellular motility, signaling, and sensory reception. Cilium formation requires intraflagellar transport of structural and signaling components and involves 22 different proteins organized into intraflagellar transport (IFT) complexes IFT-A and ...

ORGANISM(S): Homo sapiens (Human)

2022-12-02 | PXD037049 | Pride

Longitudinal scRNAseq profiling of memory B cells in mRNA vaccinated individuals post BA.1-breakthrough infection

Memory B cells play a fundamental role in host defenses against viruses. This dataset aimed at understanding the recruitment and remodeling of the memory B cell repertoire in the context of BA.1-breakthrough infection in BNT162b2 mRNA vaccinated individuals. All four donors enrolled in the study had...

ORGANISM(S): Homo sapiens

2023-08-15 | E-MTAB-12651 | biostudies-arrayexpress

Targeting B-cell malignancies with the beta-emitting anti-CD37 radioimmunoconjugate ¹⁷⁷Lu-NNV003.

Not available

S-EPMC6717602 | biostudies-literature

Translational development of a novel BAFF-R CAR-T therapy targeting B-cell lymphoid malignancies.

Not available

S-EPMC10991874 | biostudies-literature

Integration of T helper and BCR signals governs enhanced plasma cell differentiation of memory B cells by regulation of CD45 phosphatase activity.

Not available

S-EPMC8435664 | biostudies-literature

Analysis of prebiotic carbohydrate utilization by Bifidobacterium lactis Bl-04 using differential transcriptomics

The global transcriptome of the Bifidobacterium animalis subsp. lactis Bl-04 was analyzed during exponential growth on 11 prebiotic carbohydrates and glucose to identify the specific gene cluster differentially upregulated in response to each carbohydrate. Affymetrix hybridization experiments were p...

ORGANISM(S): Bifidobacterium animalis subsp. lactis

2013-10-23 | E-GEOD-41906 | biostudies-arrayexpress

Enhancing bioaerosol sampling by Andersen impactors using mineral-oil-spread agar plate.

Not available

S-EPMC3584084 | biostudies-literature

Factors Associated with Dental Service Use Based on the Andersen Model: A Systematic Review.

Not available

S-EPMC7967618 | biostudies-literature

Determinants of healthcare use based on the Andersen model: a study protocol for a systematic review of longitudinal studies.

Not available

S-EPMC8137164 | biostudies-literature

The proteome of hand eczema assessed by tape stripping

Hand eczema (HE) is a prevalent skin disease. However, classification of HE into different subtypes remains challenging. Limited number of prior studies have employed invasive biopsy-based strategies; yet, studies of the HE proteome using non-invasive tape stripping methodology have not been reporte...

ORGANISM(S): Homo sapiens (Human)

2023-04-26 | PXD039665 | Pride

Proteome Subtypes Atopic dermatitis Hand eczema Tape stripping

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2351 Results

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