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Role of Atg16L1 in skin biology
In order to unravel the functional role of autophagy in skin homeostasis, we performed single-cell RNA-sequencing on total skin of 10-weeks-old male mice lacking ATG16L1 selectively in keratinocytes. Keratinocyte-specific ATG16L1 knock-out (KO) mice do not show an overt skin phenotype. By performing...
ORGANISM(S): Mus musculus 
2023-07-13 | GSE218854 | GEO
We use an MS-based proteomic approach to demonstrate the physical interaction between the exosomal marker CD63 and mutant huntingtin, likely occurring upon transfer of the latter within the MVBs compartment, confirming how such pathway diversion can indeed regard autophagy substrate proteins (and ot...
ORGANISM(S): Homo sapiens (Human) 
2026-05-13 | PXD076375 | Pride
Tumor-intrinsic expression of the autophagy gene Atg16l1 suppresses anti-tumor immunity in colorectal cancer (bulk RNA-seq)
Tumor-intrinsic expression of the autophagy gene Atg16l1 suppresses anti-tumor immunity in colorectal cancer (single cell RNA-seq)
We utilized 10X single cell RNA sequencing to investigate in murine liver how Atg16l1 deletion in AKPS colorectal cancer organoids impacted phenotypic programming of organoid cells and myeloid cells in the tumor microenvironment. Atg16l1 KO and Wt cells were inoculated into the liver of NSG mice via...
ORGANISM(S): Mus musculus 
2023-08-28 | GSE192514 | GEO
The experiment was performed to identify autophagy targets in wildtype and autophagy-deficient primary neurons. Therefore, cortico-hippocampal neurons were isolated from Atg16L1flox:CAG-CreTmx mice and treated with Tamoxifen (Tmx) to induce the knockout (KO) or EtOH for wildtype (WT) in-vitro. WT an...
ORGANISM(S): Mus musculus (Mouse) 
2022-11-15 | PXD031555 | Pride
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