Bao Yun Y - OmicsDI

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Proteomics (9)
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Homo sapiens (4)
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cellular organisms (2)
Bacteroides cellulosilyticus DSM 14838 (2)
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Oryza sativa temperate japonica subgroup (2)
Galdieria sulphuraria (2)
synthetic bacterium JCVI-Syn3A (2)
Schwanniomyces etchellsii (2)
Cyperus rotundus (2)
Influenza A virus (A/California/07-00002/2009(H1N1)) (2)
Aedes albopictus C6/36 cell densovirus (2)
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soil metagenome (2)
Fusarium oxysporum f. sp. conglutinans Fo5176 (2)
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Mus (1)

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pride (2)
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Mass spectrometry (2)
Mass Spectrometry (2)
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Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Q Exactive (1)

Publication Date

2024 (4)
2023 (3)
2020 (3)
2016 (1)
2012 (1)
2017 (1)
2022 (1)
2018 (1)

UNIPROT ID/AC

P17676 (2)
P15260 (2)
P67775 (2)
O60674 (2)
P01112 (2)
P05231 (2)
P08887 (2)
P40763 (2)
P40189 (2)
P01579 (2)
P23458 (2)
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O15524 (2)
O14543 (2)
P42224 (2)
Q06124 (2)
Q07889 (2)
P28482 (2)
Q02750 (2)
P04049 (2)
P62993 (2)

CHEBI ID

CHEBI:4307 (1)
CHEBI:47954 (1)
CHEBI:17522 (1)
CHEBI:17396 (1)
CHEBI:14648 (1)
CHEBI:28804 (1)
CHEBI:40721 (1)
CHEBI:58227 (1)
CHEBI:57702 (1)
CHEBI:20891 (1)
CHEBI:18047 (1)
CHEBI:42717 (1)
CHEBI:55501 (1)
CHEBI:7101 (1)
CHEBI:17158 (1)
CHEBI:37051 (1)
CHEBI:16069 (1)
CHEBI:4593 (1)
CHEBI:18202 (1)
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CHEBI:86396 (1)
CHEBI:12575 (1)
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CHEBI:128477 (1)
CHEBI:144365 (1)
CHEBI:28123 (1)
CHEBI:63581 (1)
CHEBI:16749 (1)
CHEBI:30821 (1)
CHEBI:63154 (1)

Metabolite Name

Monomethyl glutaric acid (1)
Ethylmalonic acid (1)
1-[(1R)-2-[(4-chlorophenyl)methyl]-1-(hydroxymethyl)-7-methoxy-1'-spiro[3,9-dihydro-1H-pyrido[3,4-b]indole-4,4'-piperidine]yl]-1-butanone (1)
L-erythro-biopterin (1)
Isoguanine (1)
Ubiquinone-2 (1)
3-hydroxy-2-methylbutanoic acid (1)
D-2-aminopentanoic acid (1)
Hydroxyacetone (1)
S-sulfo-L-cysteine (1)
N-methyl-6-pyridone-3-carboxamide (1)
N(2),N(2)-dimethylguanosine (1)
Quinaldic acid (1)
Dihydrolipoic acid (1)
D-glucitol (1)
N(6)-acetyl-L-lysine (1)
Sphingomyelin d18:1 (1)
N(6)-methyl-L-lysine (1)
Valeric acid (1)
(R)-prunasin (1)
N(6),N(6),N(6)-trimethyl-L-lysine (1)
Imidazol-4-ylacetic acid (1)
D-serine (1)
3-Oxooctanoyl-[acp] (1)
ITP (1)
N-acetyl-L-glutamate(2-) (1)
Skatole (1)
N(5)-[(Z)-amino(hydroxyimino)methyl]ornithine (1)
Dihydroxyfumaric acid (1)
Daidzein 7-O-beta-D-glucoside (1)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (2)

Study type

RNA-seq of coding RNA (2)

Release Date

2025 (5)
2020 (5)
2021 (4)
2024 (3)
2019 (3)
2016 (2)
2023 (2)
2022 (2)
2012 (1)
2018 (1)
2015 (1)

Lab affiliation

Zhejiang Academy of Agricultural Sciences (1)
Institute of Animal Husbandry and Veterinary Sciences, Zhejiang Academy of Agricultural Sciences (1)

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Qi2013 - IL-6 and IFN crosstalk model

Qi2013 - IL-6 and IFN crosstalk model This model [BIOMD0000000544] describes the crosstalk between IFN-gamma and IL-6 induced signalling; it aims to outline mechanisms and factors that may control the interaction between both signalling pathways, discussing a role of heterodimer formation in signa...

2024-09-02 | BIOMD0000000544 | BioModels

Qi2013 - IL-6 and IFN crosstalk model (non-competitive)

Qi2013 - IL-6 and IFN crosstalk model (non-competitive) This model [BIOMD0000000543] describes the crosstalk between IFN-gamma and IL-6 induced signalling; it aims to outline mechanisms and factors that may control the interaction between both signalling pathways, discussing a role of heterodimer f...

2024-09-02 | BIOMD0000000543 | BioModels

RNA Sequencing Analysis Generates Comprehensive Transcriptomic Landscape and Identifies PTK6 as a Novel Tumor Suppressor Gene in Esophageal Squamous Cell Carcinoma

We performed the integrative transcriptome analysis of human esophageal squamous cell carcinoma (ESCC) using Illumina high-throughput sequencing. A total of 187 million 38bp sequencing reads were generated containing 7 billion bases for three pairs of matched patient-derived ESCC clinical specimens ...

ORGANISM(S): Homo sapiens

2012-06-01 | E-GEOD-29968 | biostudies-arrayexpress

Imaginal disc growth factor maintains cuticle structure and controls melanization in the spot pattern formation of Bombyx mori

The complex stripes and patterns of insects play key roles in behavior and ecology. However, the fine-scale regulation mechanisms underlying pigment formation and morphological divergence remain largely unelucidated. Here we demonstrated that imaginal disc growth factor (IDGF) maintains cuticle s...

2020-09-20 | MTBLS1825 | MetaboLights

Comparative proteomic analysis revealed complex responses to classical/novel duck reovirus infections in the spleen cells of Cairna moschata

Duck reovirus (DRV), a member of the genus Orthoreovirus in the family Reoviridae, was first isolated from Muscovy ducks. The disease associated with DRV causes great economic losses to the duck industry. However, the responses of duck (Cairna moschata) to the classical/novel DRV (C/NDRV) infections...

ORGANISM(S): Cairina moschata

2020-08-24 | PXD009703 | Pride