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TranscriptomicsGenotyping by SNP array of individuals from the general population of Finland and from the population sub-isolate late-settlement area
The dataset includes SNP genotypes and CNP signals for 40 individuals from the capital region of Finland representing general population (IDs as FIN_#) and 41 individuals from the population sub-isolate Late-settlement area (IDs as LSFIN_#).
ORGANISM(S): Homo sapiens 
2010-09-21 | E-MTAB-382 | biostudies-arrayexpress
TranscriptomicsRNA-seq of human ex vivo ovarian cancer models with matched stromal cells - part II
Ascites or solid tumour from patients with ovarian cancer was collected and grown in culture as ex vivo models. Each sample has a tumour component and some samples have matched stromal cells, which were separated into individual cultures. RNA-seq was performed on these models to establish gene expre...
ORGANISM(S): Homo sapiens 
2021-08-05 | E-MTAB-10801 | biostudies-arrayexpress
TranscriptomicsIntracellular expression pattern of recombinant Mtb strain TB294 overexpressing sigma factor A
We previously showed that increased expression of the principal sigma factor, SigA, mediates the capacity of Mycobacterium tuberculosis 210 strains to grow more rapidly in human monocytes, compared to other strains. To identify SigA-regulated genes that favor intracellular mycobacterial growth, we u...
ORGANISM(S): Mycobacterium tuberculosis 
2010-10-08 | E-GEOD-13780 | biostudies-arrayexpress
TranscriptomicsRNA-seq of human trauma patients with and without haemorrhagic shock
Patients were recruited between February 2008 and March 2019 through the Activation of Coagulation and Inflammation in Trauma (ACIT-II) study, a prospective platform cohort study evaluating aspects of coagulation and inflammation in trauma patients (NHS REC: 07/Q0603/20). Patients at the Royal Londo...
ORGANISM(S): Homo sapiens 
2026-10-29 | E-MTAB-16212 | biostudies-arrayexpress
UnknownPolymerase Chain Reaction on Respiratory Tract Specimens of Immunocompromised Patients to Diagnose Pneumocystis Pneumonia: A Systematic Review and Meta-analysis.
Not available
S-EPMC11259226 | biostudies-literature
ProteomicsEndophyte-promoted Phosphorous Fixation in Poplar
Studying the endophyte strains of poplar that help the plant solubilize phosphate, we observed direct evidence of endophyte-promoted phosphorous fixation. Using synchrotron x-ray fluorescence (SR-XRF) microscopy combined with x-ray absorption near-edge structure (XANES), we visualized the nutrient p...
ORGANISM(S): Populus Trichocarpa (ncbitaxon:3694) 
2020-01-29 | MSV000084860 | MassIVE
UnknownThe diagnosis of mucormycosis by PCR in patients at risk: a systematic review and meta-analysis.
Not available
S-EPMC11905852 | biostudies-literature
UnknownComparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data.
Not available
S-EPMC6637191 | biostudies-literature
ProteomicsA systematic and scalable approach for dissecting the molecular 2 mechanisms of transcriptional regulation in bacteria
Gene regulation is one of the most ubiquitous processes in biology. And yet, while the catalogue of 15 bacterial genomes continues to expand rapidly, we remain ignorant about how almost all of the genes in 16 these genomes are regulated. Characterizing the molecular mechanisms by which regulatory se...
ORGANISM(S): Escherichia Coli 
2018-04-13 | PXD007892 | JPOST Repository
TranscriptomicsmiRNA profiling by Illumina sequencing technology
miRNAs are 19-25 nucleotides long small RNAs now well-known for their regulatory roles in the development and diseases through post-transcriptional and translational controls in a wide range of species. Mammalian hibernation is a physiological process involving dramatic metabolic suppression and cel...
ORGANISM(S): Urocitellus parryii 
2010-11-30 | E-GEOD-19807 | biostudies-arrayexpress
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