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TranscriptomicsTissue-specific dysregulation of DNA methylation in aging
The normal aging process is a complex phenomenon associated with physiological alterations in the function of cells and organs over time. Although an attractive candidate for mediating transcriptional dysregulation, the contribution of epigenetic dysregulation to these progressive changes in cellul...
ORGANISM(S): Rattus norvegicus 
2010-05-01 | E-GEOD-17332 | biostudies-arrayexpress
TranscriptomicsGenome-wide DNA methylation in normal and IUGR pancreatic islets
Intrauterine growth restriction (IUGR) increases susceptibility to age-related diseases including type 2 diabetes (T2DM), and is associated with permanent and progressive changes in gene expression and epigenetic regulation. We studied cytosine methylation throughout the genome in pancreatic islets...
ORGANISM(S): Rattus norvegicus 
2010-06-24 | E-GEOD-16839 | biostudies-arrayexpress
TranscriptomicsA restricted repertoire of cytosine methylation changes in neonates following intrauterine growth restriction
Perturbations of the intrauterine environment can affect fetal development during critical periods of plasticity, and can increase susceptibility to a number of age-related diseases (e.g. type 2 diabetes mellitus; T2DM), manifesting sometimes decades later. We hypothesized that this biological memo...
ORGANISM(S): Homo sapiens 
2010-02-17 | E-GEOD-17727 | biostudies-arrayexpress
GenomicsWhole-Genome Sequencing of 128 Ashkenazi Jewish individuals
We sequenced 128 individuals of Ashkenazi Jewish ancestry. All individuals were controls in other studies: (1) Longevity (Gil Atzmon's lab; Albert Einstein College of Medicine), n=74. (2) Parkinson's disease (Lorraine Clark's lab; Columbia University Medical Center), n=54. Whole-genome, high-cover...
EGAS00001000664 | EGA
UnknownPersistent Neanderthal occupation of the open-air site of 'Ein Qashish, Israel.
Not available
S-EPMC6594589 | biostudies-literature
Genomicsena-DATASET-TAGC-18-03-2014-13:20:29:283-320 - samples
Whole genome, high coverage, sequencing of 128 Ashkenazi Jewish controls
EGAD00001000781 | EGA
GenomicsThe Ashkenazi Genome Consortium Data Access Committee
Data Access Committee EGAC00001000151
EGAC00001000151 | EGA
Genomicsena-DATASET-GoT2D/T2D-GENES-09-07-2016-02:03:47:226-1135 - samples
The GoT2D study includes ~2800 samples, half T2D cases and half T2D controls, of Northern European ancestry sequenced over 3 three technologies: deep whole exome sequencing, low-pass (4x) whole genome sequencing, and OMNI 2.5M genotyping. Samples were ascertained to be phenotypically "extreme" (e.g....
EGAD00001002247 | EGA
GenomicsImputation analysis file
This data set includes the following summary level data file used for the imputation data: imputation.sv.assoc.txt: results from single variant association analysis in imputed samples
EGAD00010001184 | EGA
Genomics13K T2D-GENES analysis files
This data set includes the following summary level data files used for the 13k analysis of T2D-GENES data: wes.variants.list: list of variants to keep for any analysis of the exomes data wes.assoc.samples.list: list of samples to keep for association analysis wes.assoc.variants.list: list of variant...
EGAD00010001188 | EGA
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