Bennett Bryson B

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Unknown (13)
Transcriptomics (2)
Metabolomics (1)
Proteomics (1)

Organisms

Escherichia coli str. K-12 substr. MG1655 (1)
Homo sapiens (1)
Alphavirus (1)
Anemia (1)
Betaherpesvirinae (1)
Borrelia (1)
Cowpox virus (1)
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Cytomegalovirus (1)
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EFO:0001352 (1)
Filoviridae (1)
Hepatitis B virus (1)
Human alphaherpesvirus 1 (1)
Human betaherpesvirus 5 (1)
Human immunodeficiency virus (1)
Human immunodeficiency virus 1 (1)
Human immunodeficiency virus 2 (1)
Influenza A virus (1)
Influenza C virus (1)
Japanese encephalitis virus group (1)
Lyssavirus rabies (1)
Middle East respiratory syndrome-related coronavirus (1)
Monkeypox virus (1)
Orthopoxvirus (1)
Orthopoxvirus vaccinia (1)
Rattus (1)
Staphylococcus aureus (1)
Streptococcus pneumoniae (1)
Viruses (1)

Repository

biostudies-arrayexpress (2)
MetaboLights (1)
pride (1)

Tissue

Blood plasma (1)

Technology Type

Mass spectrometry (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
Mass Spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2012 (1)
2010 (1)
2024 (1)
2025 (1)

Metabolite Name

Swertiamarin (1)
Pimpinellin (1)
(-)-Epigallocatechin Gallate (1)
Camphoric Acid, (+)- (1)
Thioacetic acid (1)
1,2,3,6-tetragalloylglucose (1)
Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside (1)
SACCHARATE (1)
Harpagide (1)
1-(9Z,12Z-Octadecadienoyl)-2-hydroxy-sn-glycero-3-phosphoethanolamine (1)
PMPA (1)
Dihydrocitrinone (1)
Syringate (1)
Kutkoside (1)
L-SORBOSE (1)
GLUCONIC ACID (1)
Benzoylpaeoniflorin (1)
3,5-Dihydroxy-4-methoxybenzoic acid (1)
Oxypaeoniflorin (1)
Methylglyoxal (1)
Hamamelitannin (1)
5-Methoxypsoralen (1)
(-)-3-dehydroshikimic acid (1)
Beta-D-Ethyl glucuronide (1)
D-Mannoheptulose (1)
Marein (1)
D-(-)-Erythrose (1)
Procyanidin B3 (1)
Procyanidin B1 (1)
1-O-Sinapoyl-beta-D-glucose (1)

Study type

Transcription profiling by array (2)

Release Date

2018 (3)
2012 (2)
2024 (2)
2017 (2)
2010 (1)
2025 (1)
2020 (1)
2019 (1)
2011 (1)
2009 (1)

Lab affiliation

Director of Metabolomics Calico Life Sciences LLC (1)

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MAVEN2: An Updated Open-Source Mass Spectrometry Exploration Platform

MAVEN, an open-source software program for analysis of LC-MS metabolomics data, was originally released in 2010. As mass spectrometry has advanced in the intervening years, MAVEN has been periodically updated to reflect this advancement. This manuscript describes a major update to the program, MA...

2024-07-22 | MTBLS3097 | MetaboLights

Automated preparation of plasma lipids, metabolites, and proteins for LC/MS-based analysis of a high-fat diet in mice

Blood plasma is one of the most commonly analyzed and easily accessible biological samples. Here, we describe an automated liquid-liquid extraction (LLE) platform that generates accurate, precise, and reproducible samples for metabolomic, lipidomic, and proteomic analyses from a single aliquot of pl...

ORGANISM(S): Mus musculus (Mouse)

2025-05-06 | PXD049202 | Pride

Specific activation of the integrated stress response uncovers regulation of central carbon metabolism and lipid droplet biogenesis.

Not available

S-EPMC11436933 | biostudies-literature

Gene expression profiling of the ethanol tolerant strain HG228 in comparison to its parental strain Escherichia coli MG1655

The goal of this experiment is to identify the pathways that are deregulated as part of an adaptive response to high levels of ethanol in the media. Ethanol tolerant cells (HG228) grown in minimal media plus 1.5% (v/v) ethanol were hybridized against E. coli MG1655 grown under similar conditions. Th...

ORGANISM(S): Escherichia coli str. K-12 substr. MG1655

2010-06-15 | E-GEOD-21194 | biostudies-arrayexpress

Quiescent Fibroblasts Exhibit High Metabolic Activity

Many cells in mammals exist in the state of quiescence, which is characterized by reversible exit from the cell cycle. Quiescent cells are widely reported to exhibit reduced size, nucleotide synthesis, and metabolic activity. Much lower glycolytic rates have been reported in quiescent compared with ...

ORGANISM(S): Homo sapiens

2012-11-30 | E-GEOD-42612 | biostudies-arrayexpress

Large-scale evaluation of outcomes after a genetic diagnosis in children with severe developmental disorders.

Not available

S-EPMC11736166 | biostudies-literature

Intervention to influence behaviors linked to risk of chronic diseases: a multisite randomized controlled trial with African-American HIV-serodiscordant heterosexual couples.

Not available

S-EPMC4004518 | biostudies-literature

Colorectal-cancer incidence and mortality with screening flexible sigmoidoscopy.

Not available

S-EPMC3641846 | biostudies-literature

Mortality results from a randomized prostate-cancer screening trial.