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Unknown (2509)
Transcriptomics (105)
Proteomics (38)
Genomics (36)
Metabolomics (13)
Models (1)
Genomic (1)

Organisms

Homo sapiens (96)
Mus musculus (25)
Saccharomyces cerevisiae (20)
Arabidopsis thaliana (7)
Penicillium chrysogenum (3)
Aspergillus niger (3)
Danio rerio (3)
Drosophila melanogaster (3)
Agathobacter rectalis (2)
Bacteroides thetaiotaomicron (2)
Bos taurus (2)
Schizosaccharomyces pombe (1)
Ruminococcus flavefaciens FD-1 (1)
Arachis hypogaea (1)
Collimonas arenae (1)
Lotus japonicus (1)
Zea mays (1)
Gadus morhua (1)
Canis lupus familiaris (1)
Bacteria (1)
Bacteroides uniformis (1)
Caenorhabditis elegans (1)
Chlorocebus sabaeus (1)
Clostridioides difficile (1)
Clostridioides difficile 630 (1)
Clostridium sporogenes (1)
Colinus virginianus (1)
Collinsella aerofaciens (1)
Escherichia coli (1)
Klebsiella aerogenes (1)

Repository

biostudies-arrayexpress (112)
pride (35)
EGA (29)
MetaboLights (13)
BioModels (1)
dbGaP (1)
MassIVE (1)
PanoramaPublic (1)
PeptideAtlas (1)

Tissue

Cell culture (5)
Blood (4)
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Granulosa cell (3)
Brain (2)
Epithelial cell (2)
Hepatocyte (2)
Neutrophil (2)
Whole body (2)
Brain (1)
B cell (1)
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Pluripotent stem cell (1)
Primary cell (1)
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Disease

Secondary myelofibrosis (1)
Locally advanced rectal cancer (1)
Osteosarcoma (1)
Bacterial sepsis (1)
Brain glioblastoma multiforme (1)
Chronic lymphocytic leukemia (1)
Colon cancer (1)
Disease free (1)
Malignant neoplasm of ovary (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Parkinson's disease (1)
Plasmodium falciparum malaria (1)

Technology Type

Mass Spectrometry (35)
Shotgun proteomics (13)
Bottom-up proteomics (8)
Mass spectrometry (7)
Data-dependent acquisition (7)
SWATH MS (6)
Mass spectrometry assay (3)
NMR spectroscopy (3)
Data-independent acquisition (3)
Gel-based experiment (2)
Top-down proteomics (2)
Illumina (various), Illumina (Various) (1)
Illumina OncoArray (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Flow injection analysis MS - negative (3)
Illumina Genome Analyzer II (2)
Illumina HiSeq 2000 (2)
Illumina HiSeq 4000 (2)
Bruker (2)
Illumina Genome Analyzer IIx (1)
DNBSEQ-G400 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Q Exactive HF (1)
Direct infusion MS - (1)
Flow injection analysis MS - positive (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
MS Imaging - (1)
Nuclear Magnetic Resonance (NMR) - (1)
LTQ Orbitrap Elite (1)

Publication Date

2014 (20)
2011 (14)
2008 (14)
2015 (13)
2013 (13)
2010 (9)
2025 (9)
2026 (8)
2022 (8)
2024 (7)
2021 (7)
2009 (7)
2007 (7)
2017 (6)
2019 (5)
2012 (5)
2016 (4)
2018 (4)
2023 (3)
2020 (1)

UNIPROT ID/AC

P04695 (1)
P62873 (1)
P63211 (1)
A0A024R8H9 (1)
A0A024RAN2 (1)
A0A024RC46 (1)
A0A087WT59 (1)
A0A087WTX5 (1)
A0A087WXI0 (1)
A0A087WYL9 (1)
A0A087WZE9 (1)
A0A087X130 (1)
A0A087X1S3 (1)
A0A087X1V9 (1)
A0A0A0MR66 (1)
A0A0A0MS51 (1)
A0A0A0MSA7 (1)
A0A0C4DG89 (1)
A0AVT1 (1)
A0FGR8 (1)
A0FGR8-2 (1)
A0FGR8-6 (1)
A0M8Q6 (1)
A0MZ66 (1)
A1L020 (1)
A1X283 (1)
A2BFH1 (1)
A2NB46 (1)
A2NUT2 (1)
A2RRP1 (1)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000247315 (1)

CHEBI ID

CHEBI:15428 (6)
CHEBI:18186 (6)
CHEBI:25017 (6)
CHEBI:27266 (6)
CHEBI:16449 (5)
CHEBI:16708 (5)
CHEBI:16737 (5)
CHEBI:28300 (5)
CHEBI:15318 (4)
CHEBI:15891 (4)
CHEBI:15978 (4)
CHEBI:16235 (4)
CHEBI:16695 (4)
CHEBI:16750 (4)
CHEBI:16919 (4)
CHEBI:17154 (4)
CHEBI:17368 (4)
CHEBI:17750 (4)
CHEBI:24898 (4)
CHEBI:25094 (4)
CHEBI:26271 (4)
CHEBI:26986 (4)
CHEBI:30769 (4)
CHEBI:116314 (3)
CHEBI:137124 (3)
CHEBI:15603 (3)
CHEBI:15676 (3)
CHEBI:15996 (1)
CHEBI:17552 (1)
CHEBI:18367 (1)

Metabolite Name

Tyrosine (7)
Glycine (6)
Coumarin (5)
Glutamine (5)
Leucine (5)
Pyruvate (5)
Threonine (5)
Adenine (4)
Alanine (4)
Benzoate (4)
Carnitine (4)
Guanine (4)
Guanosine (4)
Lactate (4)
Proline (4)
Xanthine (4)
4-Methyl-2-oxopentanoate (3)
AMP (3)
Adenosine (3)
Anthranilate (3)
Asparagine (3)
Aspartate (3)
Betaine (3)
Choline (3)
Creatinine (3)
Cytosine (3)
Dihydrothymine (3)
Dihydrouracil (3)
Glucose (3)
Glutamate (3)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (75)
RNA-seq of coding RNA (17)
ChIP-seq (4)
Genotyping by array (2)
Other (2)
Methylation profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Human - One-color microarray (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
Spatial transcriptomics by high-throughput sequencing (1)
Comparative genomic hybridization by array (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (264)
2021 (261)
2023 (222)
2024 (221)
2020 (211)
2025 (194)
2018 (159)
2019 (156)
2017 (132)
2014 (130)
2015 (125)
2016 (116)
2013 (89)
2011 (69)
2012 (65)
2010 (46)
2009 (37)
2008 (31)
2026 (29)
2007 (18)
2002 (9)
2004 (8)
2006 (7)
2005 (7)
2003 (5)
2000 (5)
2001 (3)
1999 (1)
1996 (1)

Lab affiliation

MRC Toxicology Unit, University of Cambridge (2)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Basic Sciences, College of Veterinary Medicine (1)
Department for Cell Biology BioMedizinisches Centrum - BMC LMU Muenchen, Med. Faculty Großhaderner Straße 9 82152 Planegg-Martinsried (1)
Department of Biotechnology, TU Delft, The Netherlands (1)
Department of Genome Science, University of Washington, Seattle, USA (1)
Department of Genome Sciences, University of Washington (Seattle) (1)
Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands (1)
Department of Medical Oncology, University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. (1)
Department of Molecular Physiology, Leiden Institute of Chemistry, Leiden University (1)
Department of chemistry, University of Oslo, Norway (1)
Department of environmental science and policy, University of Milan, Milan, Italy (1)
Dept. for Neurodegenerative Diseases, German Center for Neurodegenerative Diseases, Tubingen, Germany (1)
Division Systems Biology of Signal Transduction German Cancer Research Center (DKFZ) (1)
Environmental Laboratory US Army Engineer Research and Development Center Vicksburg, MS 39180, USA (1)
Freie Universität Berlin Institut für Biologie-Mikrobiologie Königin-Luise-Straße 12-16 14195 Berlin Germany ( lab head ) (1)
German Cancer Research Center (DKFZ) (1)
Hans Merensky Chair in Avocado Research, Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0028, South Africa (1)
Head of Bioanalytics Group, Department of Environmental Toxicology (Utox), Eawag – Swiss Federal Institute of Aquatic Science and Technology, 8600 Duebendorf, Switzerland (1)
Hospital Clínico San Carlos, Instituto de Investigación Sanitaria San Carlos (IdISSC), Dept. Hematology, Megakaryopoiesis and Platelets Group, Madrid, Spain (1)
Institute of Molecular Systems Biology and Department for Health Sciences and Technology, ETH Zürich, Zurich, Switzerland (1)
Kaiser lab Goethe University Frankfurt Institute of Pharmaceutical Chemistry Max-von-Laue Str. 7-9 60438 Frankfurt am Main Germany (1)
Ludwig-Maximilians-Universität München Genzentrum Laboratory for Functional Genome Analysis Feodor-Lynen-Str. 25 D-81377 München (1)
Plant Biotechnology, Faculty of Biology, University of Freiburg, Schaenzlestr.1, D-79104 Freiburg, Germany (1)
Plasma Proteins, Sanquin Research and Landsteiner Laboratory, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands (1)
Proteomics center, Erasmus MC (1)
School of Cellular and Molecular Medicine, University of Bristol (1)
Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Canada. (1)
Sequence database group (1)
Smidt Heart Institute Cedars Sinai Medical Center (1)

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Determination of variability of fermentor-grown Aspergillus niger

Knowledge of the biological and technical variation for fermentor-grown Aspergillus niger cultures is needed to design DNA microarray experiments properly. We cultured A. niger in batch-operated fermentor vessels and induced with D-xylose. Transcript profiles were followed in detail by qPCR for 8 ge...

ORGANISM(S): Aspergillus niger

2008-12-30 | E-GEOD-11405 | biostudies-arrayexpress

Vitamin D-binding protein modifies the vitamin D-bone mineral density relationship.

Not available

S-EPMC3351032 | biostudies-literature

Effects of vitamin D binding protein phenotypes and vitamin D supplementation on serum total 25(OH)D and directly measured free 25(OH)D.

Not available

S-EPMC4763092 | biostudies-literature

Vitamin D-binding protein and vitamin D status of black Americans and white Americans.

Not available

S-EPMC4030388 | biostudies-literature

Targeting Loxosceles spider Sphingomyelinase D with small-molecule inhibitors as a potential therapeutic approach for loxoscelism.

Not available

S-EPMC6327989 | biostudies-literature

Acute Homeostatic Changes Following Vitamin D₂ Supplementation.

Not available

S-EPMC5686571 | biostudies-literature

Determination of Free 25(OH)D Concentrations and Their Relationships to Total 25(OH)D in Multiple Clinical Populations.

Not available

S-EPMC6126881 | biostudies-literature

Bioavailable vitamin D is more tightly linked to mineral metabolism than total vitamin D in incident hemodialysis patients.

Not available

S-EPMC3376220 | biostudies-literature

Impacts of 2-amino-4,6-dinitrotoluene (2-ADNT) Exposure in Northern Bobwhite

Effects of 2A-DNT on global protein expression were investigated in liver tissue for both sexes and kidney in males, all at a 30 mg/kg-d dose using nLC-MS/MS.

ORGANISM(S): Colinus virginianus (Northern bobwhite) (Tetrao virginianus)

2016-07-06 | PXD001206 | Pride

Ethnic Prevalence of Angiotensin-Converting Enzyme Deletion (D) Polymorphism and COVID-19 Risk: Rationale for Use of Angiotensin-Converting Enzyme Inhibitors/Angiotensin Receptor Blockers.

Not available

S-EPMC7478439 | biostudies-literature

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2703 Results

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