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MetabolomicsTissue metabolites in diffuse glioma and their modulations by IDH1 mutation, histology, and treatment
The discovery of the oncometabolite 2-hydroxyglutarate in isocitrate dehydrogenase 1-mutated (IDH1-mutated) tumor entities affirmed the role of metabolism in cancer. However, large databases with tissue metabolites that are modulated by IDH1 mutation remain an area of development. Here, we present a...
2022-09-07 | MTBLS3873 | MetaboLights
MetabolomicsHistorical Biobanks in Breast Cancer Metabolomics - Challenges and Opportunities

BACKGROUND: Metabolomic characterization of tumours can potentially improve prediction of cancer prognosis and treatment response. Here, we describe efforts to validate previous metabolomic findings using a historical cohort of breast cancer patients and discuss challenges with u...

2022-01-24 | MTBLS1355 | MetaboLights
ClinicalEstablishment of a Tumor Bank for Tissue Samples
Establishment of a tumor bank, consisting of tissue samples of tumor patients (benign and malign tumors) and healthy people as controls. The tissue samples will be collected systematically together with the corresponding clinical data. The biological samples, the clinical date together with prospect...
2139890 | ecrin-mdr-crc
ProteomicsQuantitative proteomic analysis of fresh-frozen human breast tissue and tumor samples using microLC-SWATH-MS
Future improvements in the field of breast cancer prevention, diagnosis and treatment require deeper knowledge and better understanding of the molecular processes and signaling pathways that lead to the transformation of normal cells to cancer ones and the disease progression. Quantitative proteome ...
ORGANISM(S): Homo sapiens (Human) 
2026-03-16 | PXD008408 | Pride
Breast tissue Fresh frozen Breast tumor Microlc Swath-ms Quantitative proteomics 
TranscriptomicsRNA-seq of coding RNA from tissue samples of 122 human individuals representing 32 different tissues
RNA-seq was performed of tissue samples from 122 human individuals representing 32 different tissues in order to study the human tissue transcriptome. This submission contains 27 new samples and the data from E-MTAB-1733. This dataset is part of the TransQST collection.
ORGANISM(S): Homo sapiens 
2015-01-14 | E-MTAB-2836 | biostudies-arrayexpress
TranscriptomicsBiobank of Karolinska Endarterectomy (BiKE)
A biobank collection of carotid plaque samples taken from patients undergoing endarterectomy operations. Samples from carotid plaques and peripheral blood mononuclear cells in a setup with clinical registry data collection. See PMID 22371308 for further details.
ORGANISM(S): Homo sapiens 
2012-03-27 | E-GEOD-21545 | biostudies-arrayexpress
ProteomicsKorean Tissue Acetylome Analysis
Through multidimensional genomic/protein multiomics analysis and integration of clinical information on tissue samples collected and stored over many years in a biobank, we analyze cancer tissue samples to provide appropriate criteria for selecting samples for such analysis.
ORGANISM(S): Homo Sapiens (human) 
2024-11-01 | PXD054690 | JPOST Repository
ProteomicsKorean Tissue Phosphoproteome Analysis
Through multidimensional genomic/protein multiomics analysis and integration of clinical information on tissue samples collected and stored over many years in a biobank, we analyze cancer tissue samples to provide appropriate criteria for selecting samples for such analysis.
ORGANISM(S): Homo Sapiens (human) 
2024-11-01 | PXD054689 | JPOST Repository
ProteomicsKorean Tissue Global Proteome Analysis
Through multidimensional genomic/protein multiomics analysis and integration of clinical information on tissue samples collected and stored over many years in a biobank, we analyze cancer tissue samples to provide appropriate criteria for selecting samples for such analysis.
ORGANISM(S): Homo Sapiens (human) 
2024-11-01 | PXD054688 | JPOST Repository
GenomicsAn Organoid Biobank for Childhood Kidney Cancers that Captures Disease and Tissue Heterogeneity
An Organoid Biobank for Childhood Kidney Cancers that Captures Disease and Tissue Heterogeneity
PRJNA565841 | ENA
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