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MetabolomicsPhototrophic biofilm assembly in microbial-mat-derived unicyanobacterial consortia: model systems for the study of autotroph-heterotroph interactions
Microbial autotroph-heterotroph interactions influence biogeochemical cycles on a global scale, but the diversity and complexity of natural systems and their intractability to in situ manipulation make it challenging to elucidate the principles governing these interactions. The study of assembling p...
2014-06-24 | MTBLS75 | MetaboLights
ProteomicsHistone-like family of nucleoid structuring protein of A. actinomycetemcomitans promotes biofilm formation and alters protein dynamics of other species within multi-species biofilm
Aggregatibacter actinomycetemcomitans is a Gram-negative organism, strongly associated with aggressive forms of periodontitis. An important virulence property of A. actinomycetemcomitans is its ability to form tenacious biofilms that can attach to abiotic as well as biotic surfaces. The histone-like...
ORGANISM(S): Candida albicans (Yeast) Aggregatibacter aphrophilus Streptococcus mutans Streptococcus oralis Aggregatibacter actinomycetemcomitans (Actinobacillus actinomycetemcomitans) (Haemophilus actinomycetemcomitans) Fusobacterium nucleatum Veillonella dispar Actinomyces oris 
2018-06-05 | PXD008444 | Pride
Multi-species biofilm Hns A. actinomycetemcomitans Label-free quantification 
MetabolomicsEnhanced fatty acid synthesis by Sigma28 in stringent responses contributes to multidrug resistance and biofilm formation in Helicobacter pylori

The metabolism of bacteria is closely associated with antibiotic resistance, yet the role of metabolism in the resistance of Helicobacter pylori remains unclear. In this study, we conducted integrated analysis using transcriptomics and non-targeted metabolomics to investigate the metabolic change...

2024-06-26 | MTBLS9981 | MetaboLights
TranscriptomicsMeta-transcriptomic analysis of the response of river biofilms to pharmaceutical products using anonymous DNA microarray
Low concentrations of pharmaceutical compounds were shown to induce transcriptional responses in isolated microorganisms, which could have consequences on ecosystem dynamics. In order to test if these transcriptional responses could also be observed in complex river microbial communities, biofilm re...
ORGANISM(S): environmental samples 
2010-07-06 | E-GEOD-20501 | biostudies-arrayexpress
Genomicsbiofilm metagenome
Biofilm
PRJNA248425 | ENA
Genomicsbiofilm metagenome
Dynamics of microbial communities in biofilm Raw sequence reads
PRJNA291038 | ENA
Genomicsbiofilm metagenome
Biofilm Targeted Locus (Loci)
PRJNA187549 | ENA
GenomicsDynamics of drinking water biofilm formation associated with Legionella spp. colonization
Dynamics of drinking water biofilm formation associated with Legionella spp. colonization
PRJEB71916 | ENA
Unknown<i>S. aureus</i> biofilm disruption using ultrasound and microbubbles: Influence of radiation force, bubble dynamics and biofilm growth conditions.
Not available
S-EPMC12648606 | biostudies-literature
ProteomicsSurface stiffness, hydration, polydimethylsiloxane (PDMS), hyaluronic acid, biofilm and bacterial mobility, protein patterns.
By a global proteomic approach and phenotypic assays, we investigated the impact of surface stiffness on E. coli biofilm formation capacity. A global proteomic approach was used in order to identify the most abundant proteins for the comparison between E. coli adhesion in PDMS 9 kPa and 574kPa, (pol...
ORGANISM(S): Escherichia coli 
2023-03-11 | PXD035233 | Pride
Motion and protein patterns on hyaluronic acid and polydimethylsiloxane depend on surface stiffnes Escherichia coli biofilm formation 
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