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ProteomicsTime-resolved inducible knock-down of Clp protease subunits in tobacco identifies putative protease substrates
The Clp protease complex in plants is the one with the highest complexity through all life kingdoms. It is composed of 14 nuclear- and plastid-encoded subunits which are allocated in different rings across the complex. The proteolytic ring (P-ring; ClpP3-ClpP6) and non-proteolytic ring (R-ring; ClpR...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-02-22 | PXD008305 | Pride
Clp protease  chloroplast  protein degradation  protease substrate  nicotiana tabacum  inducible rnai  lc-msms  shotgun proteomics 
MetabolomicsDetailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers

Background: Specialised anti-herbivory metabolites are abundant in the solanaceous genus Nicotiana. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the Nicotiana genus,...

2026-02-04 | MTBLS13756 | MetaboLights
Proteomicslincomycin treatment wild type and gun1-101
Retrograde signals emanate from the DNA-containing cell organelles (plastids and mitochondria) and control the expression of a large number of nuclear genes in response to environmental and developmental cues. Previous studies on retrograde signaling mainly analyzed the regulation of nuclear gene ex...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-06-05 | PXD011759 | Pride
Arabidopsis Retrograde signaling 
ProteomicsQuantification of Tic-Toc subunits in gun1
Quantification of Tic-Toc subunits in the wild type and gun1-101 mutants in the control conditions and treated with lincomycin or norflurazon to determine if there are differences between genotypes.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-04-23 | PXD013005 | Pride
Norflurazon Arabidopsis Wild type Gun1-101 Lincomycin 
ProteomicsProteomic analysis of WT, gun1-101, clpc1 and gun1clpc1
To understand the differences of the wild type, gun1, clpc1 and gun1clpc1 on the proteome level.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-04-23 | PXD010730 | Pride
Clpc1 Gun1-101 Chloroplast Retrograde signaling 
ProteomicsIP-MS Chloroplast precursor protein overaccumulation triggers multilevel reprogramming and a heat shock-like response in plant cells
Most of chloroplast proteins are encoded by nucleus ,synthesied in cytosol as precursors. theses precursor contains tranzit peptide and will be cut off after import finished. How plant response to chloroplast precursor overaccumulation stress(cPOS) is still unkown. Here we constructed constutitive a...
ORGANISM(S): Arabidopsis Thaliana 
2024-04-26 | PXD051764 |
ProteomicsChloroplast precursor protein overaccumulation triggers multilevel reprogramming and a heat shock-like response in plant cells
Most of chloroplast proteins are encoded by nucleus ,synthesied in cytosol as precursors. theses precursor contains tranzit peptide and will be cut off after import finished. How plant response to chloroplast precursor overaccumulation stress(cPOS) is still unkown. Here we constructed constutitive a...
ORGANISM(S): Arabidopsis Thaliana 
2024-04-23 | PXD051682 |
ProteomicsThe assembly of the photosystem II intermediate RC47 in plants involves the cooperation of the eukaryotic factor DEAP2 with PAM68The assembly of the photosystem II intermediate RC47 in plants involves the cooperation of the eukaryotic factor DEAP2 with PAM68
The initial step of oxygenic photosynthesis is the thermodynamically challenging extraction of electrons from water and release of molecular oxygen. This light-driven process, which allows for the life on Earth as we know it, is catalyzed by photosystem (PS) II in the thylakoid membrane of photosynt...
ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress) 
2023-11-01 | PXD041948 | JPOST Repository
TranscriptomicsSystems analysis of the response of photosynthesis, metabolism and growth to an increase in irradiance in the photosynthesis model organism Chlamydomonas reinhardtii
Systems analysis reveals that Chlamydomonas reinhardtii responds rapidly and flexibly to an increase in light intensity. Rising metabolite levels and post-translation regulation facilitate a rapid increase in the rate of carbon fixation and a slightly delayed increase in the rate of growth, and slow...
ORGANISM(S): Chlamydomonas reinhardtii 
2014-04-30 | E-GEOD-56800 | biostudies-arrayexpress
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