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TranscriptomicsTranscription profiling of branching and non-branching regions of the mouse embryonic lung.
During development, the proximal and distal regions of respiratory tract undergo distinct processes that ultimately give rise to conducting airways and alveoli. To gain insights into the genetic pathways differentially activated in these regions when branching morphogenesis is initiating, we charact...
ORGANISM(S): Mus musculus 
2007-09-29 | E-GEOD-1423 | biostudies-arrayexpress
GenomicsErysiphe necator strain:branching
Erysiphe necator Genome sequencing branching isolate
PRJNA248900 | ENA
ProteomicsProteome of human branching and non-branching cholangiocyte organoids
Current model systems for studying intrahepatic biliary disease fail to recapitulate the architecture of intrahepatic bile ducts. Organoids from intrahepatic cholangiocytes can with a new culture method grow with a branching pattern resembling the structure of intrahepatic bile ducts. This dataset c...
ORGANISM(S): Homo sapiens (Human) 
2022-05-09 | PXD028532 | Pride
Disease modelling Cholangiocyte organoids Cholangiocarcinoma Cholangiocytes Intrahepatic bile duct Branching morphogenesis Embryonic development 
TranscriptomicsGene expression of RonTK-/- mammary glands compared to RonTK+/+ controls during development
RON WT and RON KO at 5, 6, 7 week virgin mammary glands In the study, we demonstrated that RON regulates mammary gland branching morphogenesis in pubertal development associated with changes in gene expression. Keywords: Pubertal mammary glands In the study, we hybridized RNA from 5, 6, 7 week old ...
ORGANISM(S): Mus musculus 
2009-06-16 | E-GEOD-16629 | biostudies-arrayexpress
ProteomicsThe augmin complex architecture reveals structural insights into microtubule branching
In mitosis, the augmin complex binds to spindle microtubules to recruit the γ-tubulin ring complex (γ-TuRC), the principal microtubule nucleator, for the formation of branched microtubules. Our understanding of augmin-mediated microtubule branching is strongly hampered by the lack of structural info...
ORGANISM(S): Xenopus laevis (African clawed frog) 
2022-10-13 | PXD034895 | Pride
Microtubule Augmin Nucleation Cell cycle Branching 
TranscriptomicsCellular and gene expression patterns associated with root bifurcation in Selaginella
To identify possible molecular mechanisms with a role in root branching initiation in S. moellendorffii, we employed the developmental root branching assay for an RNA-seq experiment and sampled root tips on each day from 0 to 5 d after the first branching (time point 0), in which 300 µm apical parts...
ORGANISM(S): Selaginella moellendorffii 
2022-02-12 | E-MTAB-11402 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of initial stages of metanephric development in mouse and rat
In this study we identify molecules with highly restricted expression patterns during the initial stages of metanephric development, when the ureteric bud has entered the metanephric mesenchyme and initiated branching morphogenesis. Using the Affymetrix Mouse Genome 430 2.0 Array, we compare gene ex...
ORGANISM(S): Mus musculus 
2007-07-24 | E-GEOD-1983 | biostudies-arrayexpress
TranscriptomicsTime course gene expression profiling of mouse mammary gland TEB and duct cells throughout branching morphogenesis
Branching morphogenesis of the mammary gland is driven by the highly motile terminal end bud (TEB) throughout pubertal development. The stem cell enriched, proliferative TEB branches as it invades the mammary fat pad to create a complex network of ducts. The gene expression programs specific to the ...
ORGANISM(S): Mus musculus 
2014-07-07 | E-GEOD-57724 | biostudies-arrayexpress
GenomicsRNA-Seq study of gene expression in feather branching
RNA-Seq study of gene expression in feather branching
PRJNA434089 | ENA
TranscriptomicsTranscription factor AtDOF4.2 regulates shoot branching and seed coat formation in Arabidopsis
Plant-specific DOF-type transcription factors regulate various biological processes. Here, we characterized a silique-abundant gene AtDOF4.2 for its functions in Arabidopsis. AtDOF4.2 is localized in the nuclear region and has transcriptional activation activity in both yeast and plant protoplast as...
ORGANISM(S): Arabidopsis thaliana 
2012-10-19 | E-GEOD-41682 | biostudies-arrayexpress
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