Bryson Bryan B - OmicsDI

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Unknown (4)
Proteomics (3)

Organisms

Crunoecia irrorata (3)
Arion vulgaris (3)
Streptococcus suis 05ZYH33 (3)
Desulfococcus multivorans DSM 2059 (3)
Laodelphax striatellus (3)
NEWT:186536 (3)
Neocapritermes taracua (3)
Metarhizium robertsii ARSEF 2575 (3)
Sinorhizobium meliloti (3)
Myodes glareolus (3)
Brenneria nigrifluens (3)
Campylobacter hepaticus (3)
Rhizopus delemar (3)
Tetrastichus (3)
Brucella anthropi ATCC 49188 (3)
Pinus nigra (3)
Influenza A virus (A/Wilson-Smith/1933(H1N1)) (3)
Fusarium fujikuroi IMI 58289 (3)
Syntrophus aciditrophicus (3)
Acidipropionibacterium acidipropionici (3)
Staphylococcus aureus subsp. aureus MN8 (3)
Dendrobaena veneta (3)
Sulfuritalea (3)
Aspergillus flavus (3)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (3)
Serratia inhibens PRI-2C (3)
Pygoscelis adeliae (3)
Haematococcus (3)
Pristhesancus sp. 00004635 (3)
Orbicella faveolata (3)

Repository

pride (3)

Tissue

Macrophage (1)
Epithelial cell (1)

Technology Type

Mass Spectrometry (3)
Bottom-up proteomics (2)
Data-dependent acquisition (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Publication Date

2026 (1)
2024 (1)
2016 (1)

Release Date

2025 (1)
2021 (1)
2016 (1)
2011 (1)

Lab affiliation

Ragon Institute MIT Biological Engineering (1)
Department of Biological Engineering, MIT, Cambridge, USA Ragon Institute of Mass General, Harvard, and MIT, Cambridge, USA (1)
MIT Department of Biological Engineering David H Koch Institute for Integrative Cancer Research (1)

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Mycobacterium tuberculosis surface proteomics

Surface shaving Mtb using two concentrations of trypsin: 0.4 ug/mL and 0.05 ug/mL. Both bacteria and supernatant without the bacteria were subject to trypsinization, to allow for a ratio between samples to identify candidate surface proteins.

ORGANISM(S): Mycobacterium tuberculosis H37Rv

2024-12-11 | PXD052936 | Pride

PhagoID: Quantitative in situ proximity labeling defines the proteomes of bead- and microbe-containing phagosome lumina across species, maturation, and immune activation

The phagosome is an immune organelle that integrates signals from diverse cargos to drive pathogen killing, tissue homeostasis, and antigen presentation. How this compartment coordinates such diverse functions remains incompletely understood. A comprehensive view of phagosomal composition across cel...

ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse)

2026-10-02 | PXD055598 | Pride

Apex2 Turboid Proximity labeling Phagosome proteome Phagosomal proteome Hrp Phagosome lumen Phagosomal lumen Phagosome

Lysine Acetylation Dynamics - The Tec Kinase-Regulated Phosphoproteome Reveals a Mechanism for the Regulation of Inhibitory Signals in Murine Macrophages

Cultured carcinoma cells were stimulated with growth factors and lysine acetylation and/or tyrosine phosphorylation dynamics were quantified.

ORGANISM(S): Homo sapiens (Human)

2016-04-11 | PXD002013 | Pride

Tyrosine phosphorylation Lysine acetylation

Anti-SARS-CoV-2 Antibody Levels Measured by the AdviseDx SARS-CoV-2 Assay Are Concordant with Previously Available Serologic Assays but Are Not Fully Predictive of Sterilizing Immunity.

Not available

S-EPMC8373027 | biostudies-literature

Intervention to influence behaviors linked to risk of chronic diseases: a multisite randomized controlled trial with African-American HIV-serodiscordant heterosexual couples.