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GenomicsScourfieldia caeca isolate:fresh water
Scourfieldia caeca isolate:fresh water Genome sequencing
PRJNA592406 | ENA
TranscriptomicsTranscriptome in developing caeca
Hox genes are required for the development of the intestinal caecum, a major organ of species eating plants. We have analysed the transcriptional regulation of Hoxd genes in caecal buds and show that they are controlled by a series of enhancers located in a gene desert telomeric to the HoxD cluster....
ORGANISM(S): Mus musculus 
2013-10-23 | E-GEOD-44367 | biostudies-arrayexpress
ProteomicsProteogenomic analysis of caeca dissected from Gammarus fossarum
Proteomic analysis of caeca of gammarids sampled in four different population of Gammarus fossarus (Mandorne, Séran, Ardillat, Baculy). The aim of the project is to analyze the environmental effect of inter- and intra- population proteomic diversity of a key organ involved in organism fitness and t...
ORGANISM(S): Gammarus fossarum 
2023-07-25 | PXD037805 | Pride
Heavy metal response Proteomics Proteogenomics Fitness Vulnerability Tolerance Caeca Gammarus fossarum 
TranscriptomicsTranscription landscape at the HoxD locus in developing caeca
Hox genes are required for the development of the intestinal caecum, a major organ of species eating plants. We have analysed the transcriptional regulation of Hoxd genes in caecal buds and show that they are controlled by a series of enhancers located in a gene desert telomeric to the HoxD cluster....
ORGANISM(S): Mus musculus 
2013-10-23 | E-GEOD-44362 | biostudies-arrayexpress
TranscriptomicsRNA-seq of liver and pyloric caeca in salmon fry before and after initial feeding
The salmon fry was sampled at day 0 (before initial feeding) and day 1 (20h after initial feeding). The fish was about 0.2g, liver and pyloric caeca were dissected and used for RNA-seq. Fish was given standard commercial diets with high PUFA.
ORGANISM(S): Salmo salar 
2018-12-29 | E-MTAB-7312 | biostudies-arrayexpress
GenomicsChicken caeca microbiota
Caeca microbiota composition in response to non-antibiotic dietary additives
PRJEB20379 | ENA
TranscriptomicsSpatial organization of chromatin at the HoxD locus in developing caeca (4C tiling chip)
Hox genes are required for the development of the intestinal caecum, a major organ of species eating plants. We have analysed the transcriptional regulation of Hoxd genes in caecal buds and show that they are controlled by a series of enhancers located in a gene desert telomeric to the HoxD cluster....
ORGANISM(S): Mus musculus 
2013-10-23 | E-GEOD-44357 | biostudies-arrayexpress
TranscriptomicsRNA-seq of stomach and pyloric caeca from Atlantic salmon (Salmo salar) fed diets containing chitin from shrimp and black soldier fly larvae
Farmed Atlantic salmon was given either a 6 % cellulose diet, a diet containing 6 % shrimp shell chitin or a diet containing 6 % chitin from black soldier fly larvae for a period of 4 weeks. The fish were split into six tanks at the beginning of the experiment; six fish per tank and two tanks per di...
ORGANISM(S): Salmo salar 
2021-08-15 | E-MTAB-10594 | biostudies-arrayexpress
ProteomicsProteogenomic analysis of gills and caeca from Gammarus fossarum
Proteome profiles of gills and caeca from three Gammarus fossarum males established by next-generation proteomics
ORGANISM(S): Gammarus fossarum 
2023-09-15 | PXD040344 | Pride
Crustacea Gills Proteomics Proteogenomics Amphipoda Caeca Gammarus fossarum 
TranscriptomicsSpatial organization of chromatin at the HoxD locus in developing caeca (4C-seq)
Hox genes are required for the development of the intestinal caecum, a major organ of species eating plants. We have analysed the transcriptional regulation of Hoxd genes in caecal buds and show that they are controlled by a series of enhancers located in a gene desert telomeric to the HoxD cluster....
ORGANISM(S): Mus musculus 
2013-10-23 | E-GEOD-44360 | biostudies-arrayexpress
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