Cai J J - OmicsDI

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Unknown (17675)
Proteomics (452)
Metabolomics (77)
Transcriptomics (67)
Genomics (14)
Genomic (2)
Other (1)

Organisms

Homo sapiens (348)
Mus musculus (78)
Saccharomyces cerevisiae (8)
Arabidopsis thaliana (7)
Rattus norvegicus (5)
Drosophila melanogaster (4)
Haloarcula hispanica (3)
Bombyx mori (3)
Ailuropoda melanoleuca (2)
Plasmodium yoelii yoelii 17XNL (2)
Haloferax mediterranei (1)
Neurospora crassa OR74A (1)
Myzus persicae (1)
Schistosoma japonicum (1)
Brassica rapa subsp. pekinensis (1)
Mytilus edulis (1)
Macaca mulatta (1)
Columba livia (1)
Clostridium acetobutylicum (1)
Citrus sinensis (1)
Setaria italica (1)
Oryza sativa Japonica Group (1)
Triticum aestivum (1)
Danio rerio (1)
Fusarium graminearum PH-1 (1)
Gallus gallus (1)
Klebsiella variicola UCI 18 (1)
Morchella sextelata (1)
Mus (1)
Oryctolagus cuniculus (1)

Organisms

Homo sapiens (1)

Repository

pride (213)
PeptideAtlas (135)
iProX (92)
biostudies-arrayexpress (76)
MetaboLights (72)
MassIVE (9)
EGA (5)
GNPS (3)
dbGaP (2)
MetabolomicsWorkbench (2)
geo (1)
GPMDB (1)
jPOST (1)
ENA (1)

Tissue

Breast (72)
Cell culture (52)
Liver (44)
Epithelial cell (17)
Blood plasma (11)
Hepatocyte (9)
Permanent cell line cell (9)
Blood serum (7)
Brain (7)
Leaf (7)
Liver (6)
Primary cell (6)
Stem cell (6)
Whole body (6)
Heart (4)
Kidney (4)
Lung (4)
Placenta (4)
Plant cell (4)
Thyroid nodule (4)
Others (3)
Blood cell (3)
HeLa cell (3)
Peripheral blood mononuclear cell (3)
T cell (3)
Plasma Non-glyco (2)
Ascites (2)
B cell (2)
Epithelial cells (1)
Lung (1)

Disease

Breast Carcinoma (36)
Breast cancer (10)
Colon cancer (3)
Liver cancer (3)
Malignant neoplasm of ovary (3)
Prostate adenocarcinoma (3)
Wounds and Injuries (3)
Cancer (2)
Brain cancer (2)
Hepatocellular carcinoma (2)
Lung adenocarcinoma (2)
Salmonella gastroenteritis (2)
Uveal melanoma (2)
Not Available (1)
Age related macular degeneration (1)
Alzheimer's disease (1)
Bacterial sepsis (1)
Beta thalassemia (1)
Brain glioblastoma multiforme (1)
Cervix carcinoma (1)
Disease free (1)
Endometrial Endometrioid Adenocarcinoma (1)
Influenza (1)
Low grade glioma (1)
Lung cancer (1)
Lymphoma (1)
Malaria (1)
Male infertility (1)
Medullary thyroid carcinoma (1)
Melanoma (1)

Technology Type

Mass Spectrometry (215)
Shotgun proteomics (97)
Mass spectrometry (62)
Bottom-up proteomics (32)
Affinity purification coupled with mass spectrometry proteomics (25)
Data-dependent acquisition (20)
SWATH MS (18)
Data-independent acquisition (14)
Gel-based experiment (14)
Mass spectrometry assay (9)
Top-down proteomics (8)
DiaPASEF (5)
SRM/MRM (3)
ESI (2)
ION_TORRENT, Ion Torrent Proton (1)
NMR spectroscopy (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
HDMSE (1)
MSE (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (27)
Liquid Chromatography MS - negative - reverse phase (19)
Liquid Chromatography MS - positive - hilic (19)
Liquid Chromatography MS - negative - hilic (15)
Gas Chromatography MS - positive (4)
Liquid Chromatography MS - alternating - hilic (4)
Illumina NovaSeq 6000 (3)
Liquid Chromatography MS - (3)
Liquid Chromatography MS - alternating - reverse phase (3)
Q Exactive (2)
Q Exactive HF (2)
TripleTOF 6600 (2)
Orbitrap Exploris 480 (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - negative (2)
Linux Bash Scripting (1)
NEBNext Ultra II Directional RNA Library Prep (1)
Qiagen RNeasy Mini Kit (1)
With L-glutamine supplemented with 10% fetal bovine serum (FBS) (Gibco) and 1% penicillin-streptomycin (10,000 units/mL penicillin and 10 mg/mL streptomycin) (Gibco). (1)
R (1)
10X Chromium (1)
Illumina MiSeq (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
Instrument (1)
MaXis (1)
Orbitrap Eclipse (1)
Q Exactive HF-X (1)
Q Exactive mass spectrometer (Thermo Scientific) (1)

Publication Date

2015 (78)
2022 (72)
2025 (60)
2024 (59)
2023 (50)
2021 (44)
2020 (38)
2026 (35)
2013 (17)
2010 (13)
2018 (11)
2014 (11)
2017 (10)
2019 (10)
2016 (7)
2011 (7)
2012 (6)
2009 (4)
2008 (4)
2004 (4)
2007 (2)
2006 (2)
2005 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

B4E3A4 (106)
P60709 (106)
P63261 (106)
P25705 (105)
A5A3E0 (104)
P06576 (104)
Q9BYX7 (102)
P68032 (101)
P68133 (101)
I3L4N8 (100)
P00367 (100)
P62736 (100)
P63267 (100)
P69891 (100)
P69892 (100)
P68363 (99)
Q13707 (99)
Q9BQE3 (99)
P05787 (98)
P0CG38 (98)
P49448 (98)
Q562R1 (98)
Q7Z794 (98)
P0CG39 (97)
P11021 (97)
P13645 (97)
Q15084 (97)
P69905 (96)
P35908 (95)
P68366 (95)

ENSEMBL ID

ENSG00000170477 (75)
ENSG00000147251 (72)
ENSG00000204131 (72)
ENSG00000229353 (72)
ENSG00000247315 (42)
ENSG00000176092 (33)

CHEBI ID

CHEBI:15891 (24)
CHEBI:17368 (23)
CHEBI:30769 (23)
CHEBI:17895 (22)
CHEBI:17750 (21)
CHEBI:16467 (20)
CHEBI:16737 (20)
CHEBI:16919 (20)
CHEBI:16704 (19)
CHEBI:16708 (19)
CHEBI:18183 (19)
CHEBI:16335 (18)
CHEBI:16750 (18)
CHEBI:16828 (18)
CHEBI:17154 (18)
CHEBI:17568 (18)
CHEBI:28044 (18)
CHEBI:16414 (17)
CHEBI:17203 (17)
CHEBI:17295 (17)
CHEBI:17351 (17)
CHEBI:17405 (17)
CHEBI:17596 (17)
CHEBI:15354 (16)
CHEBI:15428 (16)
CHEBI:15741 (16)
CHEBI:15756 (16)
CHEBI:15971 (16)
CHEBI:16015 (16)
CHEBI:16235 (16)

Metabolite Name

Hypoxanthine (20)
Adenine (18)
Uracil (18)
Adenosine (17)
Taurine (17)
Betaine (16)
Creatinine (16)
Uridine (16)
Creatine (14)
Guanosine (14)
L-Arginine (14)
Glycerophosphocholine (13)
Citrulline (12)
Cytidine (12)
Guanine (12)
N-Acetylputrescine (12)
Oleamide (12)
Palmitic acid (12)
Choline (11)
Citric acid (11)
Cytosine (11)
Deoxyinosine (11)
Dimethylglycine (11)
Histamine (11)
L-Tyrosine (11)
Ornithine (11)
Xanthine (11)
1-Methyladenosine (10)
3-Methylhistidine (10)
4-Pyridoxic acid (10)

First Public Date

2014 (1)

Modification

15.994915 (3)
57.021464 (3)
42.010565 (1)
79.966331 (1)
Not available (1)

Study type

Transcription profiling by array (38)
RNA-seq of coding RNA (12)
ChIP-seq (6)
RNA-seq of non coding RNA (4)
RNA-seq of coding RNA from single cells (3)
Genotyping by array (2)
Comparative genomic hybridization by array (2)
Proteomic profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Animal - High-throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (2711)
2022 (2430)
2023 (2239)
2024 (2221)
2021 (1824)
2020 (1351)
2019 (969)
2018 (802)
2017 (683)
2016 (590)
2015 (439)
2026 (431)
2014 (319)
2013 (223)
2012 (154)
2011 (115)
2010 (91)
2009 (61)
2008 (37)
2006 (21)
2007 (17)
2004 (8)
2005 (5)
2001 (4)
2003 (3)
2002 (1)
2000 (1)
1997 (1)

Lab affiliation

Shenzhen People’s Hospital (5)
Institute of Biophysics, Chinese Academy of Sciences (4)
Sun Yat-sen University (4)
Institute of Immunology and Department of Orthopaedics of the Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China (3)
Zhejiang University (3)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Department of Biological Sciences, Purdue University (2)
Department of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu 610041, China. (2)
Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (2)
Harvard Medical School (2)
Institute of Botany, Chinese Academy of Sciences (2)
Jiangsu Academy of Agricultural Sciences (2)
LEO Foundation Center for Cutaneous Drug Delivery Department of Pharmacy University of Copenhagen Denmark (2)
The First Affiliated Hospital of Zhejiang University School of Medicine (2)
University of Science and Technology of China (2)
Xiamen University (2)
hong kong baptist university (2)
+8617812007228 (1)
1 Affiliated Hangzhou First People’s Hospital, State Key Laboratory of Medical Proteomics, School of Medicine, School of Future Biomedicine, Westlake University, Hangzhou, Zhejiang Province, China. 2 Westlake Center for Intelligent Proteomics, Westlake Laboratory of Life Sciences and Biomedicine, Hangzhou, Zhejiang Province, China. 3 Research Center for Industries of the Future, School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, China. (1)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 3Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 3Biological and Biomedical Sciences Program, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA. (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 5Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 8Department of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
Aarhus University, Department of Molecular Biology and Genetics (1)
Assistant Professor, Clinical Cancer Prevention, University of Texas MD Anderson Cancer Center (1)
Associate Professor Developmental and Regenerative Biology School of Biomedical Sciences Faculty of Medicine The Chinese University of Hong Kong (1)
Associate Professor, Division of Hematology, Department of Internal Medicine, The Ohio State University Wexner Medical Center (1)
BCI Mass spectrometry Facility 1.02 & 1.03 1st floor Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ (1)
BGI-Shenzhen (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine 269 Campus Drive CCSR 3205b Stanford, CA 94305-5175, USA (1)

18288 Results

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