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ProteomicsVacuum insulated probe heated electrospray ionization source (VIP-HESI) significantly enhances micro flow rate chromatography signals in the Bruker timsTOF mass spectrometer.
Nano-flow chromatography-tandem mass spectrometer (nLC-MS/MS) is a popular choice in proteome research as it provided high-sensitivity analysis with minimal sample usage, but its quantitative proteomics applications become restricted by low analytical throughput, and low robustness. To circumvent th...
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2023-05-24 | PXD040497 | Pride
Slice-pasef Electrospray ionization (esi) Dia-pasef Micro-flow rate chromatography Vacuum insulated probe heated electrospray ionization source (vip-hesi) Captive spray (cs) 
ProteomicsA complete telomere-to-telomere genome of bread wheat presents insights into the evolution, transcriptome, and proteome of a hexaploid genome
The complete assembly of vast and complex plant genomes, like the hexaploid wheat genome, remains challenging. Here, we present CS-IAAS, a comprehensive telomere-to-telomere (T2T) gap-free Triticum aestivum L. reference genome, encompassing 14.51 billion base pairs and featuring all 21 centromeres a...
ORGANISM(S): Triticum aestivum (Wheat) 
2024-12-29 | PXD050500 | Pride
Bread wheat Gap-free genome Proteome 
Proteomicsmuscular changes upon desmin mutation
a knockin mouse model was generatded that expresses the desmin mutant R405W either heterozygotic or homozygotic. the soleus muscle from 6 wt animals and each 6 aniamls with either heterzygotic or homozygotic mutation of desmin were extracted and embedded for cryotome sectioning. Muscle sections from...
ORGANISM(S): Mus musculus (Mouse) 
2025-11-10 | PXD042319 | Pride
Demin Tissue Fiber Muscle 
ProteomicsProteomic analysis of the sponge (Porifera) Aggregation Factor implicates an ancient protein domain toolkit for allorecognition and adhesion in animals
The discovery that sponges (Porifera) can fully regenerate from aggregates of dissociated cells launched them as one of the earliest experimental models to study the evolution of cell adhesion and allorecognition in animals. This process depends on an extracellular glycoprotein complex called the Ag...
ORGANISM(S): Clathria prolifera 
2025-06-23 | PXD058135 | Pride
Sponge Evolution Allorecognition Aggregation factor Cell-cell adhesion 
Transcriptomicspamknight ovine abomasum1
To address the protective mechanisms generated in animals on previous exposure to this parasite, using samples of abomasal mucosa collected pre- and post- challenge from animals of differing immune status in an experimental model of Teladorsagia circumcincta infection.
ORGANISM(S): Ovis aries 
2011-05-20 | E-TABM-1149 | biostudies-arrayexpress
Transcriptomicspamknight ovine abomasum
To address the protective mechanisms generated in animals on previous exposure to this parasite, using samples of abomasal mucosa collected pre- and post- challenge from animals of differing immune status in an experimental model of T. circumcincta infection.
ORGANISM(S): Ovis aries 
2011-05-20 | E-TABM-1150 | biostudies-arrayexpress
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