Castellani G G - OmicsDI

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Unknown (264)
Transcriptomics (21)
Metabolomics (8)
Proteomics (3)
Genomics (2)

Organisms

Mus musculus (13)
Homo sapiens (5)
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (2)
Rhizobium favelukesii (2)
Waddlia chondrophila (1)
Acanthamoeba polyphaga mimivirus (1)
Legionella pneumophila (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (23)
MetaboLights (8)
pride (3)

Tissue

Cell culture (1)
Cerebrospinal fluid (1)

Technology Type

Mass spectrometry (5)
Mass spectrometry assay (3)
Mass Spectrometry (3)
Shotgun proteomics (2)
Bottom-up proteomics (1)
Data-dependent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - hilic (4)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - positive - reverse phase (3)
NextSeq 500 (2)
Liquid Chromatography MS - negative - reverse phase (2)
NA (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Q Exactive (1)

Publication Date

2009 (10)
2023 (4)
2026 (4)
2011 (3)
2016 (2)
2015 (2)
2010 (2)
2025 (2)
2022 (2)
2024 (1)
2018 (1)
2021 (1)

CHEBI ID

CHEBI:15354 (3)
CHEBI:16566 (3)
CHEBI:138389 (2)
CHEBI:15698 (2)
CHEBI:15727 (2)
CHEBI:15728 (2)
CHEBI:15760 (2)
CHEBI:15940 (2)
CHEBI:1606 (2)
CHEBI:16390 (2)
CHEBI:16450 (2)
CHEBI:16827 (2)
CHEBI:17015 (2)
CHEBI:17154 (2)
CHEBI:17361 (2)
CHEBI:17620 (2)
CHEBI:17650 (2)
CHEBI:17715 (2)
CHEBI:18300 (2)
CHEBI:18344 (2)
CHEBI:1879 (2)
CHEBI:2274 (2)
CHEBI:24813 (2)
CHEBI:27468 (2)
CHEBI:28101 (2)
CHEBI:28197 (2)
CHEBI:28635 (2)
CHEBI:28865 (2)
CHEBI:30865 (2)
CHEBI:31697 (2)

Metabolite Name

4-Hydroxyproline (3)
7-Methylguanine (3)
Cytochalasin B (3)
Dimethylglycine (3)
Glycerophosphocholine (3)
H-Val-Ala-OH (3)
L-Lysine-L-valine (3)
Leu-Trp (3)
Nicotinamide N-oxide (3)
Oleamide (3)
Riboflavin (3)
Taurocholic acid (3)
(-)-Bilobalide (2)
(1-(2-hydroxypentyl)-1H-indol-3-yl)(2,2,3,3-tetramethylcyclopropyl)methanone (2)
(22E,24R)-Stigmasta-4,22-diene-3,6-dione (2)
(2E,4E)-N-[2-(4-hydroxyphenyl)ethyl]dodeca-2,4-dienamide (2)
(2R)-6-amino-2-[[(2R)-2-amino-4-carboxybutanoyl]amino]hexanoic acid (2)
(2RS)-Lotaustralin (2)
(2S)-3-hydroxy-2-[[(2S)-pyrrolidin-1-ium-2-carbonyl]amino]propanoate (2)
(2S)-4-methylsulfanyl-2-[[(2S)-pyrrolidin-1-ium-2-carbonyl]amino]butanoate (2)
(2S)-5-amino-2-[[(2R)-2-amino-3-methylbutanoyl]amino]-5-oxopentanoic acid (2)
(2S)-6-amino-2-[[(2R)-2,5-diamino-5-oxopentanoyl]amino]hexanoic acid (2)
(3S,4R)-2-(hydroxymethyl)oxolane-2,3,4-triol (2)
(3beta,5alpha,6beta,22E,24R)-23-Methylergosta-7,22-diene-3,5,6-triol (2)
(4Z,6E)-1,7-diphenylhepta-4,6-dien-3-one (2)
(Z)-7-[(1S,4R,5S,6R)-5-[(E,3S)-3-hydroxyoct-1-enyl]-2-oxabicyclo[2.2.1]heptan-6-yl]hept-5-enoic acid (2)
1,2-Diethylhydrazine (2)
1,3,5-Triazine-2,4-diamine, N-(phenylmethyl)- (2)
1-(1Z-octadecenyl)-sn-glycero-3-phosphocholine (2)
1-(3-Chlorophenyl)-3-prop-2-enylthiourea (2)

Study type

Transcription profiling by array (18)
ChIP-seq (2)
Methylation profiling by array (1)
RNA-seq of total RNA (1)
RNA-seq of coding RNA (1)

Release Date

2021 (39)
2022 (36)
2023 (33)
2024 (31)
2025 (31)
2020 (27)
2018 (16)
2009 (15)
2017 (12)
2016 (10)
2011 (7)
2010 (7)
2015 (6)
2019 (4)
2026 (3)
2013 (3)
2012 (3)
2006 (2)
2014 (1)
2008 (1)

Lab affiliation

Department of Brain Sciences Faculty of Biology Weizmann Institute of Science 234 Herzl Street Rehovot 7610001 Israel (1)
Instituto de Biotecnología y Biología Molecular Facultad de Ciencias Exactas. Universidad Nacional de La Plata. CCT La Plata CONICET Calle 49 y 115 1900. La Plata Argentina (1)
Instituto de Biotecnología y Biología Molecular. Departamento de Ciencias Biologicas, Facultad de Ciencias Exactas, Universidad Nacional de La Plata. CONICET. (1)

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Neutrophil cathepsin G and risk of cardiovascular events in patients with diabetes mellitus.

Not available

S-EPMC12659094 | biostudies-literature

Determination of hair cortisol in horses: comparison of immunoassay vs LC-HRMS/MS.

Not available

S-EPMC9613578 | biostudies-literature

Identification of a DNA methylation signature in blood from subjects affected by Down syndrome

Down syndrome is characterized by a wide spectrum of clinical signs, which include cognitive and endocrine disorders and haematological abnormalities. Although it is well established that the causative defect of Down syndrome is the trisomy of chromosome 21, the molecular bases of Down syndrome phen...

ORGANISM(S): Homo sapiens

2015-03-03 | E-GEOD-52588 | biostudies-arrayexpress

microarray of healthy heart tissue of mouse (BALB/c nude female mice) after proton-beam treatment to cure breast cancer

Proton irradiation: 2, 6 and 9 Gy + untreated controls Times after irradiation: 3 and 10 days Associated pubblication: Sala, C.; Tarozzi, M.; Simonetti, G.; Pazzaglia, M.; Cammarata, F.P.; Russo, G.; Acquaviva, R.; Cirrone, G.A.P.; Petringa, G.; Catalano, R.; et al. Impact on the Transcriptome of ...

ORGANISM(S): Mus musculus

2024-04-30 | E-MTAB-14006 | biostudies-arrayexpress

Expression data from ethanol and saline exposed mice [mRNA]

Mouse models of Fetal Alcohol Spectrum Disorder can be used to assess molecular changes underlying the disorder. Neonatal ethanol exposure in mice can be used to model third trimester ethanol exposure in humans. Mice were injected with 2.5 g/kg twice on each of postnatal days 4 and 7. Mice were allo...

ORGANISM(S): Mus musculus

2015-03-07 | E-GEOD-66644 | biostudies-arrayexpress

Surrogate analyte approach for the determination of endogenous cortisol, cortisone, DHEA, DHEAS in horse hair and sheep wool by LC-HRMS/MS.

Not available

S-EPMC12041554 | biostudies-literature

Transcription profiling of Acanthamoeba polyphaga mimivirus infecting Acanthamoeba castellanii for different lengths of time

A culture of Acanthamoeba castellanii cells was infected with mimivirus. At specified times after infection, infected cells aliquots were subjected to total RNA extraction. Cy3 labeled cDNA was hybridized on custom designed Agilent oligonucleotide tiling microarrays covering both strands of the mimi...

ORGANISM(S): Acanthamoeba polyphaga mimivirus

2010-03-18 | E-MTAB-187 | biostudies-arrayexpress

Effect of Lactobacillus acidophilus D2/CSL (CECT 4529) supplementation in drinking water on chicken crop and caeca microbiome.

Not available

S-EPMC6980619 | biostudies-literature

The Novel Histological Prostatic Inflammation Score Helps Defining the Association Between Stromal and Glandular Inflammation with the Risk of Prostate Cancer at Prostate Biopsy.

Not available

S-EPMC11763971 | biostudies-literature

RpkA, a highly conserved GPCR with a lipid kinase domain, has a role in phagocytosis and anti-bacterial defense.

Not available

S-EPMC3206951 | biostudies-literature