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MetabolomicsIntegrated metabolomic and microbiomic analysis of the effects of dietary Candida utilis replacement of fishmeal on the growth, physiology, and intestinal microbiota of southern catfish (Silurus meridionalis)

Liver samples of southern catfish were sent to Majorbio Bio-pharm Technology Co., Ltd. for untargeted metabolomic sequencing referring to previous study [27]. Grinding beads were added to the liver samples, and metabolites were extracted via low-tempe...

2025-11-19 | MTBLS13346 | MetaboLights
TranscriptomicsGlobal gene expression in catfish spleen after injection of lipopolysaccharide
A high-density oligonucleotide microarray for channel catfish (Ictalurus punctatus) was designed and produced with Maskless Array Synthesizer technology (MAS). The microarray contained ~379,652 24-mer oligonucleotides covering ~18,999 catfish unique sequences. The global expression profiling of the ...
ORGANISM(S): Ictalurus punctatus 
2005-11-30 | E-GEOD-3261 | biostudies-arrayexpress
TranscriptomicsSkin Deep: Early Mucosal Responses in Blue Catfish (Ictalurus furcatus) Skin to Aeromonas hydrophila Infection
Fish skin is a critical regulatory organ, serving not only as a physical barrier to pathogen entry, but also as a sophisticated integrator of aquatic environmental, social and nutritional cues through roles in immunity, osmoregulation, and endocrine signaling. Integral to the complexity of teleost s...
ORGANISM(S): Ictalurus furcatus 
2014-06-17 | E-GEOD-42491 | biostudies-arrayexpress
TranscriptomicsExpression analysis of Edwardsiella ictaluri 93-146 wild type and mutant strains during catfish fry encounter.
Edwardsiella ictaluri is the causitive agent of enteric septicemia of catfish, one of the most important diseases impacting US catfish industry. The overall objective of this study is to identify E. ictaluri genes required for host encounter. 4-plex NimbleGen array study using total RNA obtained fro...
ORGANISM(S): Edwardsiella ictaluri 93-146 
2013-12-15 | E-GEOD-46007 | biostudies-arrayexpress
UnknownProduction and utilization of a high-density oligonucleotide microarray in channel catfish, Ictalurus punctatus.
Not available
S-EPMC1501020 | biostudies-literature
ProteomicsIdentification, synthesis, and in vitro activity of antimicrobial peptide from African catfish against the Extended-Spectrum Beta-Lactamase (ESBL) producing Escherichia coli.
The global surge in multi-drug resistant bacteria, including extended-spectrum β-lactamase (ESBL)-producing Escherichia coli has led to a growing need for new antibacterial compounds. Despite being promising, the potential of fish-derived antimicrobial peptides (AMPs) in combating ESBL-E. coli is la...
ORGANISM(S): Clarias gariepinus 
2024-06-25 | PXD049239 | Pride
Catfish Esbls Antimicrobial peptides Drug discovery Lc-ms/ms 
TranscriptomicsExpression analysis of Edwardsiella ictaluri 93-146 wild type and mutant strains during catfish serum exposure.
Edwardsiella ictaluri is the causitive agent of enteric septicemia of catfish, one of the most important diseases impacting US catfish industry. The overall objective of this study is to identify E. ictaluri genes required for serum resistance. 4-plex array study using total RNA obtained from wild t...
ORGANISM(S): Edwardsiella ictaluri 93-146 
2013-12-15 | E-GEOD-46011 | biostudies-arrayexpress
GenomicsTachysurus fulvidraco strain:yellow catfish
Tachysurus fulvidraco strain:yellow catfish Transcriptome or Gene expression
PRJNA224745 | ENA
TranscriptomicsComparative transcriptomics of geographic strains of catfishes exposed to chronic high temperatures
This study examined differentially expressed (DE) gene transcripts and regulated pathways of two geographically distinct channel catfish (Ictalurus punctatus) strains and one hybrid catfish (I. punctatus x [blue catfish] I. furcatus) strain to test whether one particular catfish type handled thermal...
ORGANISM(S): Ictalurus punctatus x Ictalurus furcatus 
2014-04-23 | E-GEOD-56982 | biostudies-arrayexpress
ProteomicsEffects of temperature and cyanotoxins on the catfish liver proteome
Water is one of the resources most affected by the intensification of human activities. As consequences of these activities, we have eutrophication and global warming, which can also favor the blooms of cyanobacteria that produce cyanotoxins. Here we present the hepatic proteome of females and males...
ORGANISM(S): Rhamdia quelen 
2024-05-22 | PXD046475 | Pride
Temperature Catfish Cyanotoxins 
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