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ProteomicsA Macrophage-Collagen Fragment Axis Mediates Subcutaneous Adipose Tissue Remodeling
Efficient collagen degradation is essential for adaptive subcutaneous adipose tissue (SAT) expansion that protects against ectopic lipid deposition during weight gain. Here, we aimed to further define the mechanism for this collagenolytic process. We show that loss of collagen type-1 (CT1) and incre...
ORGANISM(S): Mus musculus (Mouse) 
2024-06-16 | PXD043721 | Pride
Collagen fragments Macrophages Fibrosis Ecm-remodeling Collagen endocytosis Subcutaneous adipose tissue Cd206 
ProteomicsA Novel High-Throughput Immunoaffinity LC-MS/MS Assay for P III-NP and other Fragments of Type III Procollagen in Human Serum
The amino-terminal propeptide of type III procollagen (P-III-NP) is used with IGF-I to detect the illicit use of growth hormone and to monitor growth hormone therapy. However, the only currently available assays for P-III-NP are immunoassays, which are not well harmonized. In addition, other fragmen...
ORGANISM(S): Homo Sapiens 
2024-10-28 | PXD052245 | panorama
ModelsBaker2017 - The role of cytokines, MMPs and fibronectin fragments osteoarthritis
Baker2017 - The role of cytokines, MMPs and fibronectin fragments osteoarthritis This model is described in the article: Mathematical modelling of cytokines, MMPs and fibronectin fragments in osteoarthritic cartilage. Baker M, Br...
2024-09-02 | BIOMD0000000928 | BioModels
TranscriptomicsMadin-Darby Canine Kidney (MDCK) cells grown in 2-dimensional and 3-dimensional type I collagen culture.
In order to gain insight into epithelial morphogenesis and the influence of culture geometry on gene expression patterns, Madin Darby Canine Kidney (MDCK) epithelial cells where grown in 2-dimensional (2D) culture or 3-dimensional (3D) culture . MDCK cells cultured in 2D were plated atop a pre-soli...
ORGANISM(S): Canis lupus familiaris 
2013-06-03 | E-GEOD-28381 | biostudies-arrayexpress
UnknownInteraction of the α2A domain of integrin with small collagen fragments.
Not available
S-EPMC4246064 | biostudies-literature
ProteomicsProteomic analysis of collagen membrane and matrix
High-resolution shotgun proteomic analysis on two porcine collagen-based biomaterials designed for guided bone regeneration and soft tissue augmentation was perfomed. A porcine-derived collagen membrane and a collagen matrix derived from peritoneum and/or skin were digested, separated by nano-revers...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2021-09-09 | PXD019298 | Pride
Soft tissue augmentation Collagen Bone regeneration 
TranscriptomicsECM-dependent gene expression in normal and tumor-derived mammary organoids
A critical step in metastasis is cancer cell dissemination. Dissemination and metastasis are associated with specific genetic changes and changes in extracellular matrix (ECM), but how these changes interact to enable dissemination remains unclear. Here we tested the importance of ECM to disseminat...
ORGANISM(S): Mus musculus 
2012-08-16 | E-GEOD-39173 | biostudies-arrayexpress
UnknownEnrichment of Collagen Fragments Using Dimeric Collagen Hybridizing Peptide for Urinary Collagenomics.
Not available
S-EPMC8204671 | biostudies-literature
ProteomicsSpecies identification of ancient Lithuanian fish remains using collagen fingerprinting
Morphological identification of ancient bone is often problematic due to heavy fragmentation that generally influences zooarchaeological assemblages. Fish bones are more taphonomically sensitive than those of other vertebrates as they are typically smaller and less biomineralised. Thus, taxonomic id...
ORGANISM(S): Salmo trutta fario Scophthalmus maximus Sander lucioperca Scophthalmus rhombus Salmo trutta trutta Gadus morhua (Atlantic cod) Esox lucius Salmo salar (Atlantic salmon) Silurus glanis Carassius carassius 
2018-08-29 | PXD010041 | Pride
Zooarchaeology Zooms Ichthyoarchaeology Species identification Neolithic Collagen fingerprinting Fish bone 
ProteomicsEnhancing ZooMS applications with MALDI-FTICR mass spectrometry on Pleistocene material showing variable collagen preservation
Advances in high-throughput molecular analyses of collagen peptides, especially ZooMS (Zooarchaeology by Mass Spectrometry), have addressed the issue of intense skeletal fragmentation at Palaeolithic archaeological sites, which hinders morphological identification. However, the challenge of variable...
ORGANISM(S): Bos taurus (Bovine) Rangifer tarandus (Reindeer) (Cervus tarandus) 
2025-03-17 | PXD056898 | Pride
Lc-msms Paleoproteomics Prm Casi Zooms Maldi-ms Collagen 
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