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ProteomicsChemical mixture effects on the simplified human intestinal microbiota (SIHUMIx): Assessing Bisphenols and PFAS at environmentally realistic concentrations
The gut microbiota in our intestinal tract metabolizes non-digestible compounds into essential nutrients and signaling molecules (i.e. short-chain fatty acids), affecting our immune system and the development of various human diseases. Ingested environmental contaminants (xenobiotics) can disrupt th...
ORGANISM(S): Blautia producta ATCC 27340 = DSM 2950 Anaerostipes caccae Clostridium butyricum DSM 10702 Escherichia coli str. K-12 substr. MG1655 Bacteroides thetaiotaomicron Bifidobacterium longum subsp. longum Erysipelatoclostridium ramosum DSM 1402 Lactobacillus plantarum subsp. plantarum 
2024-06-13 | PXD048273 | Pride
Scfa Continuous bioreactor model system Bisphenols Gut microbiota Pfas Microbiome-dependent toxicity Metaproteomics 
UnknownGrowth Dynamics of Bacterial Populations in a Two-Compartment Biofilm Bioreactor Designed for Continuous Surfactin Biosynthesis.
Not available
S-EPMC7285194 | biostudies-literature
UnknownThe proteome of osteoblasts in a 3D culture perfusion bioreactor model compared with static conditions.
Not available
S-EPMC11982442 | biostudies-literature
TranscriptomicsMeasuring the effects of hypoxia on transcription in Caulobacter crescentus
To test the effects of hypoxia on transcription in Caulobacter crescentus, we cultured cells in a New Brunswick bioreactor under controlled conditions. Prior to innoculation, the medium was bubbled with laboratory air at maximum flow and stirred at 300 rpm for 2 hours. After this period, the mediu...
ORGANISM(S): Caulobacter vibrioides 
2010-06-21 | E-GEOD-21127 | biostudies-arrayexpress
UnknownGenome-resolved analyses of oligotrophic groundwater microbial communities along phenol pollution in a continuous-flow biodegradation model system.
Not available
S-EPMC10090433 | biostudies-literature
UnknownA Fluid Dynamics-Model System for Advancing Tissue Engineering and Cancer Research Studies: Biological Assessment of the Innovative BioAxFlow Dynamic Culture Bioreactor.
Not available
S-EPMC12731094 | biostudies-literature
TranscriptomicsDifferentiation of a human gut microbiota in an improved three-stage continuous culture model of the human large intestine under anaerobia generated by the bacteria
A three-stage continuous fermentative system was developed to simulate and control physicochemical factors of the gut biology. Inoculation was of each reactor was performed from a human fecal sample which was initially amplified with a batch procedure. Samples from the initial feces, the batch and f...
ORGANISM(S): uncultured bacterium 
2013-05-07 | E-GEOD-46677 | biostudies-arrayexpress
UnknownModular Bioreactor Design for Directed Tendon/Ligament Tissue Engineering.
Not available
S-EPMC8945228 | biostudies-literature
UnknownSubaqueous 3D stem cell spheroid levitation culture using anti-gravity bioreactor based on sound wave superposition.
Not available
S-EPMC10197840 | biostudies-literature
TranscriptomicsKinetic transcriptome study reveals an essentially intact cellulase induction system in a cellulase hyper-producer Trichoderma reesei strain
The filamentous fungus Trichoderma reesei is the main industrial cellulytic enzymes producer. Several strains have been developed in the past using random mutagenesis, and despite impressive performance enhancements, the pressure for low-cost cellulases has stimulated continuous research in the fiel...
ORGANISM(S): Trichoderma reesei 
2014-12-10 | E-GEOD-60908 | biostudies-arrayexpress
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