Continuous labeling

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Transcriptomics (1480)
Unknown (459)
Genomics (225)
Proteomics (192)
Metabolomics (12)
Other (2)

Organisms

Homo sapiens (340)
Arabidopsis thaliana (237)
Mus musculus (208)
Drosophila melanogaster (148)
Saccharomyces cerevisiae (63)
Rattus norvegicus (37)
Schizosaccharomyces pombe (32)
Caenorhabditis elegans (25)
Escherichia coli (24)
Oryza sativa Japonica Group (23)
Synechocystis sp. PCC 6803 (17)
Methanococcus maripaludis S2 (15)
Plasmodium falciparum (15)
Carassius auratus (14)
Oryza sativa (13)
Danio rerio (13)
Pseudomonas aeruginosa (10)
Sus scrofa (10)
Pimephales promelas (9)
Bos taurus (9)
Zea mays (9)
Clostridium acetobutylicum (8)
Pseudomonas putida (8)
Streptococcus mutans UA159 (7)
Caldicellulosiruptor saccharolyticus (6)
Salmo salar (6)
Ovis aries (6)
Gallus gallus (6)
Salmonella enterica (5)
Chlamydomonas reinhardtii (5)

Organisms

Mus musculus (72)
Homo sapiens (6)
Arabidopsis thaliana (5)
Clostridium acetobutylicum ATCC 824 (2)
Rhodobacter capsulatus (2)
Pseudomonas aeruginosa (2)
Saccharomyces cerevisiae (2)
Pimephales promelas (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Zea mays (1)
Oryza sativa (1)
Danio rerio (1)
Rattus norvegicus (1)
Gallus gallus (1)
soil metagenome (1)

Repository

biostudies-arrayexpress (1604)
pride (178)
ENA (103)
geo (12)
MetaboLights (12)
MassIVE (8)
iProX (3)
GPMDB (1)

Tissue

Cell culture (93)
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Heart (5)
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Root (3)
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Cell suspension culture (2)
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Embryonic stem cell (2)
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Amnion (1)
Amniotic fluid (1)
B cell (1)
Blood (1)
Blood cell (1)
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Epithelium of stomach (1)
Eye (1)
HEK-293T cell (1)
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T cell (1)

Disease

Normal (13)
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Type 1 Diabetes Mellitus (1)
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E. coli infected control (1)
B. pseudomallei infected (1)
Y. pestis infected (1)
Partially decidualised (1)
Mastitis (1)
Chronic lymphocytic leukemia (1)
Chronic myelogenous leukemia (1)
Chicken Anaemia Virus infected (1)

Technology Type

Mass Spectrometry (178)
Shotgun proteomics (119)
Bottom-up proteomics (33)
Data-dependent acquisition (22)
Top-down proteomics (11)
Mass spectrometry (10)
Affinity purification coupled with mass spectrometry proteomics (9)
Data-independent acquisition (6)
Gel-based experiment (3)
MSE (3)
Mass spectrometry assay (2)
Affinity proteomics (1)
HDMSE (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Axon GenePix 4000B scanning hardware (11)
G2565BA DNA microarray scanner [Agilent] (9)
ScanArray 4000XL [PerkinElmer] (8)
ScanArray 5000 [PerkinElmer] (5)
Illumina HiSeq 2500 (5)
Illumina NovaSeq 6000 (5)
Axon- GenePix4000B (4)
NextSeq 500 (4)
PALM Robo LCM (3)
Chemostat (3)
Illumina HiSeq 4000 (3)
Agilent Micro Array Scanner G2565CA (2)
ScanArray Lite [PerkinElmer] (2)
ScanArray [PerkinElmer] (2)
GeneChip Scanner 3000 [Affymetrix] (2)
G2565AA DNA microarray scanner [Agilent] (2)
ScanArray Express HT [PerkinElmer] (2)
GenePix 4000B [Axon Instruments] (2)
NextSeq 2000 (2)
Affymetrix miRNA 3.1 (1)
Not Applicable (1)
Not Applicablre (1)
Affymetrix GeneChip (1)
Microarray scanner system (1)
G2565BA Microarray Scanner (1)
Agilent SureScan High Resolution scanner (1)
Axon Instruments GenePix 4000B scanner (1)
Labfors 2 chemostat (Infors AG, Bottmingen, Switzerland) (1)
VersArray ChipReader [Bio-Rad Laboratories] (1)
Axon GenePix4000B (1)

Publication Date

2013 (296)
2010 (287)
2008 (158)
2011 (155)
2012 (135)
2014 (119)
2015 (110)
2009 (104)
2007 (62)
2016 (60)
2021 (54)
2025 (32)
2024 (31)
2020 (31)
2022 (27)
2005 (26)
2026 (25)
2019 (21)
2018 (21)
2006 (19)
2023 (16)
2017 (16)
2004 (7)
2003 (1)

CHEBI ID

CHEBI:16811 (4)
CHEBI:16335 (4)
CHEBI:17203 (4)
CHEBI:15971 (4)
CHEBI:16857 (4)
CHEBI:16015 (4)
CHEBI:16027 (4)
CHEBI:17895 (4)
CHEBI:25351 (3)
CHEBI:28125 (3)
CHEBI:17626 (3)
CHEBI:17992 (3)
CHEBI:16543 (3)
CHEBI:17256 (3)
CHEBI:17822 (3)
CHEBI:18257 (3)
CHEBI:16708 (3)
CHEBI:17562 (3)
CHEBI:16750 (3)
CHEBI:17748 (3)
CHEBI:16977 (3)
CHEBI:72639 (3)
CHEBI:28875 (3)
CHEBI:15824 (3)
CHEBI:28842 (3)
CHEBI:15428 (3)
CHEBI:15741 (3)
CHEBI:17268 (3)
CHEBI:6650 (3)
CHEBI:17154 (3)

Metabolite Name

Glycine (3)
L-Proline (3)
L-Threonine (3)
Dihydrothymine (3)
Taurine (3)
Adenosine (3)
Succinate (3)
Adenine (3)
Inosine (3)
AA (2)
Sulforidazine (2)
DHA (2)
Mycophenolic acid (2)
TXB2 (2)
Malate (2)
EPA (2)
1-Methylnicotinamide (2)
Pyridoxamine 5'-phosphate (2)
Phosphoric acid (2)
Histidine (2)
3-Methylhistidine (2)
3-Aminobutanoic acid (2)
PC(16:0/16:0) (2)
Betaine aldehyde (2)
N2,N2-Dimethylguanosine (2)
Taurodeoxycholic acid (2)
12-HETE (2)
13-HODE (2)
15-HETE (2)
L-Alanine (2)

First Public Date

2022 (61)
2014 (19)
2017 (5)
2016 (4)
2025 (2)
2023 (2)
2021 (2)
2020 (2)
2019 (2)
2024 (1)
2018 (1)
2015 (1)
2013 (1)

Classification

bacteria (5)

Study type

Transcription profiling by array (1238)
ChIP-seq (121)
Transcription profiling by tiling array (38)
Methylation profiling by array (38)
Unknown experiment type (31)
Comparative genomic hybridization by array (31)
ChIP-chip by tiling array (14)
RNA-seq of coding RNA (14)
ChIP-chip by array (12)
Other (11)
MicroRNA profiling by array (9)
RNA-seq of coding RNA from single cells (8)
Genotyping by array (4)
Animal - One-color microarray (3)
Transcription profiling by RT-PCR (3)
Cell line - One-color microarray (2)
Translation profiling (2)
RNAi profiling by array (2)
Proteomic profiling by array (2)
RNA-seq of non coding RNA (2)
Human - Two-color microarray (1)
RIP-chip by array (1)
One-color microarray (1)
Human - Single-cell sequencing (1)
Antigen profiling (1)
Spatial transcriptomics by high-throughput sequencing (1)
ScATAC-seq (1)
DNA-seq (1)
RNA-seq of total RNA (1)

Release Date

2013 (299)
2010 (291)
2011 (165)
2008 (164)
2012 (147)
2014 (133)
2015 (124)
2009 (109)
2025 (73)
2016 (73)
2007 (66)
2022 (57)
2024 (55)
2021 (54)
2020 (52)
2023 (43)
2019 (31)
2018 (28)
2005 (27)
2017 (25)
2006 (23)
2026 (17)
2004 (5)
2003 (1)
2002 (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (55)
IMSB, ETH Zurich (4)
Lineberger Comprehensive Cancer Center at UNC Chapel Hill (4)
Department of Cell Biology, Harvard Medical School, Boston MA 02115 USA (3)
Department of Cell Biology, Harvard Medical School, Boston, MA 02115 USA (3)
Department of Chemistry and Chemical Biology, Harvard University (3)
Department of Synthetic Chemistry & Biological Chemistry, Graduate School of Engineering, Kyoto Univ. Katsura, Kyoto 615-8510, JAPAN (3)
Cancer Research UK Manchester Institute (2)
Odense University Hospital, Dept Clinical Biochemistry and Pharmacology, Odense, DK-5000, Denmark (2)
Professor, Molecular Medicine & Scientific Director, The Wertheim UF Scripps Institute (2)
1 Institute of Marine Sciences, Spanish National Research Council (CSIC), 08003 Barcelona, Spain 2 Institute of Biotechnology and Biomedicine (IBB), Universitat Autònoma de Barcelona, 08193 Bellaterra (Cerdanyola del Vallès), Spain (1)
8Clinical Protein Science & Imaging, Biomedical Centre, Department of Biomedical Engineering, Lund University, Lund, Sweden (1)
Anhui Medical University (1)
Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany (1)
Associate Professor, The Swire Institute of Marine Sciences and School of Biological Sciences, The University of Hong Kong, Hong Kong (1)
BK21 Plus KNU Multi-Omics based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Republic of Korea (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)
Biomedical Research Centre, University Hospital Hradec Kralove, Hradec Kralove, Czech Republic (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, the Netherlands (1)
CNIC (1)
Cancer Research UK Manchester Institute, UK (1)
Cardiovascular Proteomics Laboratory & Proteomics Unit Centro Nacional de Investigaciones Cardiovasculares Madrid, Spain (1)
Cedars-Sinai, Neurosurgery - Pavilion, 127 S San Vicente Blvd #A6600, Los Angeles, CA, 90048 (1)
Center for Functional Protein Assemblies (CPA), Department of Chemistry, Chair of Organic Chemistry II, Technical University of Munich, 85748 Garching, Germany (1)
Center for Neural Science and Medicine, Board of Governors Regenerative Medicine Institute, Departments of Biomedical Sciences and Neurology, Cedars-Sinai Medical Center, Los Angeles, CA, USA (1)
Center for Tuberculosis Control of Guangdong Province, Guangzhou, 510630, China (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid. (1)
Chang Gung Memorial Hospital (1)
China Jiliang University (1)
China Pharmaceutical University (1)

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Continuous clonal labeling reveals uniform progenitor potential in the adult exocrine pancreas

PRJNA720676 | ENA

Transcription profiling of human umbilical vein endothelial cells after pulsed or continuous estradiol exposure

The experiment aims to investigate differences in the transcriptional response of human umbilical vein endothelial cells to estradiol treatment associated with the mode of administration. Human umbilical vein endothelial cells were treated for 5 days with a 1h pulse of 2.4 x 10-8 M 7β-estradiol (E2...

ORGANISM(S): Homo sapiens

2008-08-29 | E-MEXP-1227 | biostudies-arrayexpress

Coupling microdroplet-based sample preparation, multiplexed isobaric labeling, and nanoflow peptide fractionation for deep proteome profiling of tissue microenvironment

Existing spatially-resolved proteomics technologies cannot provide deep proteome coverage due to limited sensitivity and poor sample recovery. Herein, we seamlessly combined laser capture microdissection with a low-volume sample processing technology that includes a microfluidic device named microPO...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2024-01-25 | MSV000093925 | MassIVE

Cognitive aging and verbal labeling in continuous visual memory.

Not available

S-EPMC7498490 | biostudies-literature

Cell-Specific Labeling Enzymes For Analysis of Cell-Cell Communication in Continuous Co-Culture

We report the orthologous screening, engineering and optimization of amino acid conversion enzymes for cell-specific proteomic labeling.

ORGANISM(S): Homo sapiens (Human)

2022-02-22 | PXD000739 | Pride

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