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GenomicsGenomic Epidemiology of Complex Diseases in Population-based Brazilian Cohorts
The EPIGEN-Brasil Initiative is so far the largest Latin American initiative in population genomics and genetic epidemiology. Its main goal is to study the association between genetic variants found in the Brazilian population and complex diseases, taking into account one of the most important chara...
EGAS00001001245 | EGA
TranscriptomicsSkin healing and scale regeneration in fed and unfed sea bream, Sparus auratus
Fish scales are an important reservoir of calcium and phosphorus and together with the skin function as an integrated barrier against environmental changes and external aggressors. Histological studies have revealed that the skin and scales regenerate rapidly in fish when they are lost or damaged. I...
ORGANISM(S): Sparus aurata 
2012-01-24 | E-GEOD-30717 | biostudies-arrayexpress
UnknownIn C57Bl6 Mice, Obesity and Subsequent Weight Loss Negatively Affected the Skeleton and Shifted the Cortical Bone Metabolome.
Not available
S-EPMC12247641 | biostudies-literature
UnknownIn C57BL/6J mice, weight loss in previously obese mice reduced bone mass and shifted the cortical bone metabolome.
Not available
S-EPMC12746795 | biostudies-literature
TranscriptomicsTranscription profiling of rat ductus arteriosus and aorta for comparison of pre and post birth oxygen effects
Compared the gene expression profiles of two contiguous vessels pre and post - birth, namely the Ductus Arteriosus (DA), committed to become a fibrous ligament, and the Aorta (Ao), which conversely takes on a permanent activity. The effect of artificially enhanced O2 tension was analyzed in DA in t...
ORGANISM(S): Rattus norvegicus 
2007-06-28 | E-GEOD-3290 | biostudies-arrayexpress
Genomicsena-DATASET-Hospital Clinic Barcelona-21-07-2015-12:09:53:274-78 - samples
RNASeq sequencing. Each library was sequenced using TruSeq SBS Kit v3-HS, in paired-end mode with a read length of 2 × 76 bp. We generated more than 20 million paired-end reads for each sample in a fraction of a sequencing lane on HiSeq2000 (Illumina Inc.) following the manufacturer’s protoc...
EGAD00001001443 | EGA
TranscriptomicsTranscriptional profiling of calyx abscission zone cells of citrus fruits and adjacent fruit rind cells during ethylene-promoted fruit abscission
Abscission is a cell separation process that takes place in particular positions of the plant body named abscission zones. In citrus, maturing fruits are shed through the calix abscission zone, which is composed by 10-15 cell layers located at the boundary between the calyx button and the fruit rind...
ORGANISM(S): Citrus sinensis 
2017-02-08 | E-MTAB-4538 | biostudies-arrayexpress
TranscriptomicsDetection of chromothripsis-like patterns from custom array platform for chronic lymphocytic leukemia diagnosis (qchip Hemo custom array v3)
Chronic lymphocytic leukemia (CLL) is the most frequent leukemia in Western countries. The main genetic alterations associated to this disease are loss of 13q14, loss of 11q23, trisomy 12 and, less frequently, 17p13 losses, and are routinely studied using fluorescence in situ hybridization. These ge...
ORGANISM(S): Homo sapiens 
2015-08-31 | E-GEOD-66922 | biostudies-arrayexpress
Genomicsena-DATASET-Hospital Clinic Barcelona-12-08-2015-11:33:40:243-146 - samples
Exome Sequencing. 3 μg of genomic DNA from each sample were sheared and used for the construction of a paired-end sequencing library as described in the paired-end sequencing sample preparation protocol provided by Illumina41. Enrichment of exonic sequences was then performed for each library usi...
EGAD00001001464 | EGA
GenomicsEpigen-Brasil - samples
Epigen-Brasil samples using HumanOmni2.5
EGAD00010000787 | EGA
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