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ProteomicsA High-resolution Systems-wide Screen for Substrates of the SCFβTrCP Ubiquitin Ligase - reproducibility evaluation
This project demonstrates a combined bioinformatics and affinity purification-mass spectrometry (AP-MS) workflow for identifying in a systems-wide manner bone fide substrates of βTrCP
ORGANISM(S): Homo sapiens (Human) 
2015-01-06 | PXD001224 | Pride
Ap-ms Perseus Interaction proteomics Βtrcp Crapome Ubiquitin e3 ligase Fbw11 
ProteomicsA High-resolution Systems-wide Screen for Substrates of the SCFβTrCP Ubiquitin Ligase
This project demonstrates a combined bioinformatics and affinity purification-mass spectrometry (AP-MS) workflow for identifying in a systems-wide manner bone fide substrates of βTrCP
ORGANISM(S): Homo sapiens (Human) 
2015-01-06 | PXD001088 | Pride
Ap-ms Perseus Interaction proteomics Βtrcp Crapome Ubiquitin e3 ligase Fbw11 
UnknownAffinity purification-mass spectrometry and network analysis to understand protein-protein interactions.
Not available
S-EPMC4332878 | biostudies-literature
ProteomicsProteomic profiling of the oncogenic septin 9 reveals isoform-specific interactions in breast cancer cells
Septins are a family of multimeric GTP-binding proteins, which are abnormally expressed in cancer. Septin 9 (SEPT9) is an essential and ubiquitously expressed septin with multiple isoforms, which have differential expression patterns and effects in breast cancer cells. It is unknown, however, if SEP...
ORGANISM(S): Homo sapiens (Human) 
2022-10-13 | PXD012977 | Pride
Breast cancer Septin interactome Septins Sept9 
UnknownRelevance Rank Platform (RRP) for Functional Filtering of High Content Protein-Protein Interaction Data.
Not available
S-EPMC4762622 | biostudies-literature
UnknownProfiling the interactome of protein kinase C ζ by proteomics and bioinformatics.
Not available
S-EPMC5828088 | biostudies-literature
ProteomicsAP-MS Raw data of C. burnetii-host PPIs
Fifty-three Coxiella effectors were expressed in HEK-293T cells, and the Strep-tagged Coxiella effectors and the corresponding interacting complex were purified for MS analysis. The LC-MS/MS analyses were performed with an Orbitrap Fusion Tribrid mass spectrometer (Thermo Fisher Scientific) coupled ...
ORGANISM(S): Homo Sapiens 
2022-03-18 | PXD032380 |
ProteomicsPOP5 dysregulation causes syndromic immunodeficiency associated with defects in ribosomal and transfer RNA processing and telomere length
The goal of this study was to investigate the molecular role of human POP5 in immune cell function, with a particular focus on identifying interaction partners and disease associated mutations that could alter POP5 activity. We performed comprehensive interactomics analyses on both wild type POP5 an...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2025-12-03 | MSV000100087 | MassIVE
ProteomicsHuman LisH domain containing protein interaction network
A protein interaction network of LisH-domain containing proteins in humans
ORGANISM(S): Homo sapiens (Human) 
2025-10-22 | PXD064011 | Pride
Lish domain 
ProteomicsDecoding the signalling profile of hematopoietic progenitor kinase 1 (HPK1) in innate immunity: a proteomic approach
The fine-tuned spatiotemporal response of leukocytes to external stimuli is a hallmark of the immune system. Sensing of stimuli occurs through cell surface receptors, which transmit signals into the cell. Signaling via β2 integrins, B cell, and T cell receptors involve similar pathways. However, the...
ORGANISM(S): Homo sapiens (Human) 
2022-02-10 | PXD021136 | Pride
Hematopoietic progenitor kinase 1  interactome  innate immunity  neutrophils 
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