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ProteomicsDDA experiments Emiliania huxleyi exposure to 3 doses of HHQ
Emiliania huxleyi: Cellular cascades induced by bacterial algicides Interactions between phytoplankton and bacteria play a central role in mediating oceanic biogeochemical cycling and microbial trophic structure in the ocean. The intricate relationships between these two domains of life are mediated...
ORGANISM(S): Emiliania huxleyi 
2019-02-15 | PXD011559 | Pride
Quorum sensing plankton and bacteria communication Dda phytoplankton 
ProteomicsSouthern ocean mesocosm metaproteomics
Mesocosms (600 L) were deployed at the Southern Ocean Time Series (SOTS) in Austral late summer during a high nutrient, low chlorophyll period. One mesocosm represented control, present-day conditions (high nutrients/low temperature/low pCO2/low Fe/low irradiance), while the other was amended to rep...
ORGANISM(S): phytoplankton environmental sample 
2022-10-26 | PXD021185 | Pride
Mesocosm Sots Phytoplankton Southern ocean Dda Metaproteomics 
ProteomicsEmiliania Huxleyi exposed to 4 treatments of HHQ
Emiliania huxleyi: Cellular cascades induced by bacterial algicides Interactions between phytoplankton and bacteria play a central role in mediating oceanic biogeochemical cycling and microbial trophic structure in the ocean. The intricate relationships between these two domains of life are mediated...
ORGANISM(S): Emiliania huxleyi 
2020-01-07 | PXD011560 | Pride
Quorum sensing bacteria and phytoplankton 
ProteomicsDetection of Low Abundance Ocean Bacterial Peptides DDA
Bacteria transform nutrients and degrade organic matter, making them an essential part of healthy ecosystems. By assaying bacterial physiology within a complex system, the status of the whole ecosystem can be investigated. Proteins are the dynamic molecules that control essential bacterial physiolog...
ORGANISM(S): Ruegeria pomeroyi Thalassiosira pseudonana 
2017-02-01 | PXD004799 | Pride
Proteomics Ruegeria pomeroyi Thalassiosira pseudonana Ocean bacteria Dda 
UnknownMS analysis of a dilution series of bacteria:phytoplankton to improve detection of low abundance bacterial peptides.
Not available
S-EPMC6006377 | biostudies-literature
ProteomicsMetaproteomic analysis of microbial community structure and function in the South China Sea
In the present study, we studied microbial composition and metabolic activity in the euphotic zone of the South China Sea. 8 samples were collected and subjected to metaproteomic analysis. Our results suggested that mixotrophic phototrophs-driven NDL carbon fixation along with phytoplankton-driven N...
ORGANISM(S): phytoplankton environmental sample 
2024-06-16 | PXD018513 | Pride
Metaproteomics South china sea; 
ProteomicsThe proteomic response to temperature in the coccolithophore Emiliania huxleyi
The coccolithophore Emiliania huxleyi was acclimated to growth under three temperatures (17, 23 and 28°C), representing control, sub-optimal and supra-optimal warming respectively. Shotgun proteomic analysis was utilised to examine the molecular mechanisms driving the cellular response of E. huxleyi...
ORGANISM(S): Emiliania huxleyi 
2023-07-20 | PXD038243 | Pride
Phytoplankton Climate change Ocean warming Marine biology 
MetabolomicsMetabolic consequences of cobalamin scarcity in diatoms as revealed through metabolomics (Thalassiosira pseudonana study)

Diatoms perform about 20% of photosynthesis on earth, play a crucial role in forming the base of the marine food web, and sequester anthropogenic carbon into the deep ocean through the biological pump. In some areas of the ocean, diatom growth is limited by the organic micronutrient cobalamin (vi...

2019-06-04 | MTBLS703 | MetaboLights
ProteomicsMetaproteomics analysis of microbial structure on the surface of Indian Ocean
In this study we characterize microbial community features on the surface of Indian Ocean. 11 samples were collected from Indian Ocean and subjected for quantitative metaproteomics analysis for taxonomic and functional analysis. Our results suggested that metabolic tuning at metaproteomics levels en...
ORGANISM(S): phytoplankton environmental sample 
2023-05-10 | PXD016285 | Pride
Dda Metaproteomics Ocean microbial 
ProteomicsDetection of Low Abundance Ocean Bacterial Peptides DIA
Bacteria transform nutrients and degrade organic matter, making them an essential part of healthy ecosystems. By assaying bacterial physiology within a complex system, the status of the whole ecosystem can be investigated. Proteins are the dynamic molecules that control essential bacterial physiolog...
ORGANISM(S): Ruegeria pomeroyi 
2017-02-02 | PXD004758 | Pride
Srm Proteomics Ruegeria pomeroyi Dia Bacteria Ocean 
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