Eat - OmicsDI

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Unknown (3375)
Genomics (383)
Transcriptomics (235)
Proteomics (45)
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Genomic (1)

Organisms

Homo sapiens (119)
Mus musculus (87)
Caenorhabditis elegans (16)
Rattus norvegicus (12)
Listeria monocytogenes (7)
Sus scrofa (5)
Danio rerio (4)
Gallus gallus (3)
Ovis aries (3)
Schizosaccharomyces pombe (2)
unidentified (2)
Listeria innocua (2)
Fusarium incarnatum (1)
Stenocarpella maydis (1)
Talaromyces rugulosus (1)
Penicillium corylophilum (1)
Penicillium viridicatum (1)
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Aspergillus multicolor (1)
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Penicillium fellutanum (1)
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Talaromyces islandicus (1)
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Aspergillus (1)
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Organisms

Homo sapiens (47)
Mus musculus (42)
Listeria monocytogenes (19)
Caenorhabditis elegans (17)
food metagenome (7)
Rattus norvegicus (5)
Escherichia coli (4)
Bacillus cereus (3)
Sus scrofa (3)
Salmonella phage KKP1402 (2)
Danio rerio (2)
human gut metagenome (2)
Listeria monocytogenes 36-25-1 (1)
Latrodectus hasseltii (1)
Olivibacter sp. EAT-5 (1)
Pantoea sp. 3_1284 (1)
Daubentonia madagascariensis (1)
Calypte anna (1)
Cyclorana alboguttata (1)
Rhinopithecus roxellana (1)
Salmonella phage sp. (1)
Listeria (1)
Aeromonas rivuli (1)
Listeria sp. (1)
Tineola bisselliella (1)
Siganus fuscescens (1)
Janthinobacterium sp. (1)
Cochliomyia hominivorax (1)
Staphylococcus sp. (1)
Homo sapiens/Mus musculus xenograft (1)

Repository

ENA (370)
biostudies-arrayexpress (134)
geo (117)
pride (31)
MetaboLights (12)
MassIVE (7)
EGA (5)
jPOST (3)
ExpressionAtlas (1)
dbGaP (1)
GNPS (1)
iProX (1)

Tissue

Saliva (5)
Cell culture (3)
Adipose tissue (2)
Blood plasma (2)
Heart (2)
Macrophage (2)
Plant cell (2)
Whole body (2)
Epicardial fat (1)
Subcutaneous adipose tissue (1)
Abdominal adipose tissue (1)
Adipose dendritic cell (1)
Brain (1)
Brown adipose tissue (1)
Cardiac muscle tissue of atrium (1)
Cotyledon (1)
Epithelial cell migration (1)
Feces (1)
Inner ear (1)
JURKAT cell (1)
Leaf (1)
Left atrium (1)
Liver (1)
Lung (1)
Neurohypophysis (1)
Primary cell (1)
Skeletal muscle (1)

Disease

Colorectal cancer (2)
Cardiovascular system disease (2)
Coronary artery disease (1)
Normal (1)
Chronic lymphoid leukemia (1)
Primary acute lymphoblastic leukemia (1)
Pretreatment primary leukemia (1)
IBDV infected (1)
Obese (1)
Chronic lymphocytic leukemia (1)
Reference (1)
Prehabilitation in patients with colorectal cancer scheduled for surgery with curative intent (1)
Head and Neck cancer (1)
Colorectal neoplasms (1)
Adenocarcinoma (1)
Colonic Neoplasms (1)
Colorectal cancer (1)
Rectal Neoplasms (1)
Colorectal Neoplasms (1)
Atrial fibrillation (1)
Listeriosis (1)
Pneumonia (1)
Preeclampsia (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (31)
Shotgun proteomics (21)
Mass spectrometry (12)
Bottom-up proteomics (3)
SWATH MS (3)
Gel-based experiment (2)
Top-down proteomics (2)
Data-independent acquisition (1)

Instrument Platform

Q Exactive (3)
LTQ Orbitrap Classic (Thermo Scientific) (3)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 2000 (2)
Q Exactive HF (2)
Liquid Chromatography MS - negative - HILIC (2)
Liquid Chromatography MS - positive - HILIC (2)
Liquid Chromatography MS - negative - reverse phase (2)
Dell PRECISION T7500 (1)
MethylationEPIC BeadChip (Illumina, San Diego, CA, USA) (1)
Affymetrix GCS 3000 (1)
GeneChip® Pico Kit (Affymetrix) (1)
Affymetrix Clariom™ S (400 Format) (1)
Illumina iScan (1)
Illumina HiSeq X (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1500 (1)
NextSeq 500 (1)
LTQ Orbitrap|1000449 (1)
HFX Orbitrap (1)
Q Exactive Plus (1)
Q-TOF Premier (Waters) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
LTQ-Orbitrap (1)

Publication Date

2015 (25)
2025 (24)
2024 (23)
2014 (21)
2026 (20)
2023 (20)
2013 (19)
2021 (18)
2016 (18)
2010 (18)
2022 (16)
2011 (13)
2020 (11)
2008 (10)
2019 (9)
2012 (9)
2018 (8)
2009 (8)
2017 (7)
2007 (6)
2006 (2)
2005 (2)

CHEBI ID

CHEBI:35704 (5)
CHEBI:16070 (4)
CHEBI:84055 (4)
CHEBI:40521 (4)
CHEBI:23818 (4)
CHEBI:73025 (4)
CHEBI:17822 (4)
CHEBI:26271 (4)
CHEBI:17126 (4)
CHEBI:27570 (4)
CHEBI:26986 (4)
CHEBI:16811 (4)
CHEBI:28300 (4)
CHEBI:16708 (4)
CHEBI:43997 (4)
CHEBI:17752 (4)
CHEBI:16870 (4)
CHEBI:24898 (4)
CHEBI:25017 (4)
CHEBI:15781 (4)
CHEBI:15846 (4)
CHEBI:28044 (4)
CHEBI:19289 (4)
CHEBI:70749 (4)
CHEBI:18211 (4)
CHEBI:43355 (4)
CHEBI:29016 (4)
CHEBI:16704 (4)
CHEBI:17138 (4)
CHEBI:17750 (4)

Metabolite Name

Pantothenate (4)
Adenine (4)
Glycerophosphocholine (4)
Propionyl-carnitine (3)
Hexanoyl-carnitine (3)
N6-Acetyl-lysine (3)
N2-Acetyl-lysine (3)
Trimethyl-lysine (3)
Dimethyl-lysine (3)
Dimethyl-arginine (3)
Butyro-betaine (3)
Dimethyl-xanthine (3)
Dimethyl-guanosine (3)
S-Adenosyl-methionine (3)
N-Acetyl-arginine (3)
Aspartate (3)
Hippurate (3)
Betaine (3)
Citrulline (3)
Ergothioneine (3)
Carnitine (3)
Serine (3)
Adenosine (3)
Threonine (3)
Cytidine (3)
Caffeine (3)
Inosine (3)
Methyl-histidine (2)
N-Acetyl-glucosamine (2)
N-Acetyl-(iso)leucine (2)

First Public Date

2026 (58)
2024 (58)
2025 (49)
2023 (48)
2022 (35)
2021 (30)
2014 (21)
2020 (19)
2019 (19)
2017 (8)
2018 (7)
2015 (7)
2013 (6)
2016 (5)

Classification

bacteria (35)
viruses (4)

Modification

15.994915 (1)
57.021464 (1)
6.020129 (1)

Study status

Recruiting (4)
Not yet recruiting (3)
Completed (3)

Study type

Transcription profiling by array (98)
RNA-seq of coding RNA (11)
Interventional (10)
Comparative genomic hybridization by array (8)
Unknown experiment type (2)
ChIP-chip by tiling array (2)
Transcription profiling by RT-PCR (2)
ChIP-seq (2)
Proteomic profiling by array (2)
Animal - High-throughput sequencing (1)
Genotyping by array (1)
Other (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (458)
2023 (435)
2021 (391)
2025 (387)
2024 (364)
2020 (275)
2019 (237)
2018 (183)
2017 (161)
2016 (138)
2015 (104)
2014 (76)
2013 (56)
2026 (50)
2012 (47)
2010 (39)
2011 (30)
2009 (24)
2008 (22)
2007 (10)
2006 (9)
2004 (4)
2005 (3)
1999 (2)
1998 (2)
2001 (1)
1997 (1)

Lab affiliation

CECAD, University of Cologne (2)
1 - College of Pharmacy, University of Sharjah, Sharjah 2 - Sharjah Institute for Medical Research, University of Sharjah, Sharjah (1)
1. Department of Biochemistry and Chemistry, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, Victoria 3086, Australia. 2. Research Centre for Extracellular Vesicles, La Trobe University, Victoria, Australia. (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Associate Professor, Department of Chemistry and Biochemistry, University of Maryland, College Park (1)
Bauru School of Dentistry, University of São Paulo, São Paulo, Brazil (1)
Beijing Chaoyang Hospital, Capital Medical University (1)
Cagliari University (1)
Case Western Reserve University (1)
Center for Neuroscience and Cell Biology of the University of Coimbra, Portugal (1)
Department of Chemical Science - University of Naples Federico II (1)
Department of Life and Environmental Sciences, Biomedical Section, University of Cagliari, Monserrato, CA, Italy. (1)
Department of Medicine, Knight Cardiovascular Institute, Oregon Health & Sciences University, Portland, Oregon, USA (1)
Department of Pharmacology, University of São Paulo. São Paulo, SP, Brazil. (1)
Department of Plant Molecular Biology (DBMV) UNIL-Sorge, Biophore Building CH-1015 Lausanne Switzerland (1)
Heart Center, Beijing Chaoyang Hospital, Capital Medical University, Beijing, China (1)
Institute of Plant Breeding and Genetic Resources- ELGO Dimitra PO Box 238 Thermi, Thessaloniki, Postcode: 57001, Greece (1)
Knight Cardiovascular Institute Oregon Health & Science University 3181 SW Sam Jackson Park Road Portland, Oregon 97239, USA (1)
Laboratory for Biomedical Mass Spectrometry, Biosciences Institute, Newcastle University, Newcastle upon Tyne, UK. (1)
MS Proteomics Group Reserach Centre for Natural Sciences Hungarian Academy of Sciences (1)
Markus Ralser, Prof. Dr. Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité University Medicine, Berlin markus.ralser@charite.de Senior Group Leader, The Francis Crick Institute, London markus.ralser@crick.ac.uk UK 0044 743 5315249 DE 0049 30 450528141 (1)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne Germany (1)
Medizinisches Proteom-Center, Ruhr-University Bochum and Department of Anesthesia, Intensive Care Medicine and Pain Therapy, University Hospital Knappschaftskrankenhaus Bochum (1)
Molecular Neuroendocrinology Research Group, Bristol Medical School: Translational Health Sciences, University of Bristol, Dorothy Hodgkin Building, Bristol, United Kingdom (1)
School of Physiology, Pharmacology and Neuroscience University of Bristol Biomedical Sciences Building University Walk Bristol - BS8 1TDE United Kingdom (1)
Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Denmark (1)
The University of Sydney (1)
Universita' degli studi di Teramo (1)
University Medicine Greifswald Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics Friedrich-Ludwig-Jahn-Str. 15a 17475 Greifswald, Germany (1)
de Duve Institute, Université Catholique de Louvain, Avenue Hippocrate 75, B-1200 Brussels, Belgium (1)

Location

United States (4)
China (2)
Iran (1)
United Kingdom (1)
Japan (1)
Italy (1)

Keyword

Prevention (2)
Inflammation Obesity (1)
Walnuts (1)
Urolithins (1)
Microbiome (1)
Diet (1)
Adenoma (1)

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Olivibacter sp. EAT-5

Olivibacter sp. EAT-5 Genome sequencing

PRJNA1178008 | ENA

Expression analysis of C. elegans eat-2, eat-2 acs-22 and eat-2 pmk-1 acs-22 mutants

PRJNA517341 | ENA

Proteomics of epicardial adipose tissue in heart failure patients with preserved ejection fraction

Background: Heart failure with preserved ejection fraction (HFpEF) has become a major public health problem with a morbidity and mortality similar to heart failure with reduced ejection fraction (HFrEF). Recently, it has been proved epicardial adipose tissue (EAT) played an important role in the pat...

ORGANISM(S): Homo sapiens (Human)

2023-01-30 | PXD028158 | Pride

EAT and coronary atherosclerosis in high-risk patients

Rationale: Epicardial adipose tissue (EAT) has been independently associated with non-calcified, high-risk coronary plaques in low-to intermediate risk subjects. Recently, a bidirectional communication was shown between EAT and diseased coronary arteries. In high-risk patients it is unknown whether ...

ORGANISM(S): Homo sapiens (Human)

2022-03-04 | PXD008852 | Pride

Coronary calcification Swath Epicardial adipose tissue Epicheart study

Expression analysis of C. elegans eat-2 acs-20 and ptr-8 eat-2 acs-20 mutants

PRJNA931231 | ENA

Expression analysis of C. elegans wild-type N2, eat-2, acs-20 and eat-2 acs-20 mutants

PRJNA517342 | ENA

GE/miRNA expression profile of Human Epicardial Adipose Tissue (EAT) and Subcutaneous Adipose Tissue (SAT) in Patients with Coronary Artery Disease (CAD) vs. Controls (CTRL) - PART 2 - miRNA

miRNA expression profiles of Human EAT vs. SAT (CTRL & CAD). The aim of the present study was to assess a miRNA expression chart characterizing EAT vs. SAT, and CAD vs. CTRL. Results provide the information that EAT is characterized by a differential expression of different miRNA when compared to it...

ORGANISM(S): Homo sapiens

2015-11-22 | E-GEOD-64563 | biostudies-arrayexpress

GE/miRNA expression profile of Human Epicardial Adipose Tissue (EAT) and Subcutaneous Adipose Tissue (SAT) in Patients with Coronary Artery Disease (CAD) vs. Controls (CTRL) - PART 1 - Genes

Gene expression profiles of Human EAT vs. SAT (CTRL & CAD). The aim of the present study was to assess a gene expression chart characterizing EAT vs. SAT, and CAD vs. CTRL. Results provide the information that EAT is characterized by a differential expression of different genes when compared to its ...

ORGANISM(S): Homo sapiens

2015-11-22 | E-GEOD-64554 | biostudies-arrayexpress

Expression analysis of C. elegans eat-2, eat-2; acs-22 and eat-2; pmk-1; acs-22 mutants

Investigation of whole genome gene expression level changes in C. elegans eat-2; acs-22 and eat-2; pmk-1; acs-22 mutant compared to the eat-2 strain.

ORGANISM(S): Caenorhabditis elegans

2019-07-31 | GSE125716 | GEO

The metagenomic data of ready-to-eat foods and human fecal samples

There are 18 ready-to-eat food samples (8 ready-to-eat meat, 7 ready-to-eat vegetables and 3 ready-to-eat fruit) and 6 human faecal samples. The samples were sequenced on the Illumina, NovaSeq PE150.

PRJEB33440 | ENA

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