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MetabolomicsDifferential alteration of plant functions by homologous fungal candidate effectors

Rust fungi are plant pathogens that cause epidemics which threatens the production of many important plant species, such as wheat, soy, coffee and poplar. Melampsora larici-populina (Mlp) causes the poplar rust and encodes at least 1184 candidate effectors (CEs), however their functions are poorl...

2020-12-03 | MTBLS2096 | MetaboLights
MetabolomicsMicrobiota-derived metabolites act as ecological effectors of colonization resistance against Salmonella Enteritidis

Colonization resistance is a fundamental ecological function of the gut microbiota that limits the expansion of enteric pathogens. Yet, the microbial effectors linking ecosystem homeostasis to pathogen control remain poorly understood. Here, we demonstrate that Salmonella Enteritidis (S. Enteriti...

2026-08-31 | MTBLS15505 | MetaboLights
ProteomicsP. sojae apoplastic effectors in soybean apoplastic fluid at different infection time points.
Soybean leaves were inoculated with P. sojae strain P6497, and apoplastic fluid was collected at 1.5, 3, and 6 hours post-inoculation (hpi). The samples were analyzed using MS to identify candidate apoplastic effectors and PsTry1.
ORGANISM(S): Phytophthora sojae strain P6497 
2025-06-14 | PXD058375 | Pride
P. sojae apoplastic effectors 
TranscriptomicsTranscriptomes and differential gene expression analysis of the Arabidopsis cells that received type-III effectors delivered by Xanthomonas campestris pv. Campestris (Xcc) bacterial mutants
Due to low numbers and poor accessibility of host cells that are targeted for effector delivery, the actual biological functions of most effectors remain elusive. Here, we developed a novel Isolation Nuclei TArgeted by Bacterial Effectors (INTABE) system, which facilitates selectively recovering nuc...
ORGANISM(S): Arabidopsis thaliana 
2022-10-22 | E-MTAB-10280 | biostudies-arrayexpress
TranscriptomicsRNA seq of tomato hairy root cultures induced with nuclear-lokalized effectors of R. irregularis
In this research we have made tomato hairy roots expressing R. irregularis nuclear-lokalized effector proteins, RiSP749, GLOIN707, GLOIN781, and GFP as a control, under the XVE promoter. Hairy roots were cultured for 3 weeks after which the expression of the effectors was induced with estradiol. 24 ...
ORGANISM(S): Solanum lycopersicum 
2025-01-01 | E-MTAB-13691 | biostudies-arrayexpress
ProteomicsThe E. coli type III secreted effectors NleB and EspL interact with the microtubule associated protein ensconsin to disrupt vesicle trafficking, part 1
Enteropathogenic and enterohaemorrhagic E. coli (EPEC and EHEC) translocate a set of type III effector proteins into host cells that are critical for bacterial virulence. These effectors subvert normal host pathways by interacting with a variety of targets within the cell, but the binding partners ...
ORGANISM(S): Homo sapiens (Human) Escherichia coli 
2016-12-22 | PXD002933 | Pride
Human E. coli Effector Host-pathogen 
TranscriptomicsExpression data from primary and secondary CD4 T cell effectors responding towards influenza A virus infection
How secondary CD4 T cell effectors, derived from resting memory cells, differ from primary cells, derived from naïve precursors, and how such differences impact recall responses to pathogens is unknown. We used microarrays to detail the global programme of gene expression underlying differences betw...
ORGANISM(S): Mus musculus 
2012-08-27 | E-GEOD-40230 | biostudies-arrayexpress
ProteomicsHost targets of Citrobacter secreted effectors
Identification of human proteins targeted by Citrobacter secreted effectors by affinity purification followed by mass spectrometry.
ORGANISM(S): Homo sapiens (Human) 
2016-06-22 | PXD003943 | Pride
Host targets Type 3 secretion system Effectors 
ProteomicsHost targets of Salmonella secreted effectors
Identification of mouse proteins targeted by Salmonella secreted effectors by affinity purification followed by mass spectrometry.
ORGANISM(S): Mus musculus (Mouse) 
2020-04-03 | PXD004002 | Pride
Host targets Type 3 secretion system Effectors 
ProteomicsUptake of oomycete RXLR effectors into host cells by clathrin-mediated endocytosis
Filamentous (oomycete and fungal) plant pathogens can deliver cytoplasmic effector proteins into host cells to facilitate disease. How RXLR effectors from the potato late blight pathogen Phytophthora infestans enter host cells is unknown. One possible route involves clathrin-mediated endocytosis (CM...
ORGANISM(S): Phytophthora infestans T30-4 Nicotiana benthamiana 
2023-07-20 | PXD040285 | Pride
Oomycete  rxlr effectors  clathrin mediated endocytosis 
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