Elav - OmicsDI

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Transcriptomics (370)
Unknown (210)
Genomics (177)
Proteomics (45)
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Organisms

Homo sapiens (177)
Mus musculus (115)
Drosophila melanogaster (66)
Arabidopsis thaliana (20)
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Trypanosoma brucei (6)
Saccharomyces cerevisiae (5)
Tetrahymena thermophila (3)
synthetic construct (2)
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Danio rerio (2)
Trypanosoma brucei brucei TREU927 (2)
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Organisms

Drosophila melanogaster (72)
Homo sapiens (23)
Mus musculus (16)
Nematostella vectensis (3)
Trypanosoma brucei (2)
Mycosarcoma maydis (2)
Magallana gigas (1)

Repository

biostudies-arrayexpress (323)
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geo (83)
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pride (4)
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Tissue

Brain (3)
Hippocampal pyramidal neuron (1)
Head (1)

Disease

Schizophrenia (1)
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Brain ischemia (1)

Technology Type

Mass spectrometry (24)
Mass spectrometry assay (14)
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Instrument Platform

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- (1)
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Publication Date

2014 (47)
2015 (45)
2013 (40)
2011 (40)
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2026 (32)
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2012 (29)
2020 (24)
2022 (22)
2024 (17)
2010 (17)
2021 (13)
2018 (12)
2017 (12)
2008 (12)
2009 (11)
2019 (6)
2007 (3)
2006 (2)
2004 (2)

UNIPROT ID/AC

A0A3B6TKL3_WHEAT (2)
A0A3B6KMD4_WHEAT (2)
A0A3B6KBY5_WHEAT (2)
A0A3B6SCE8_WHEAT (2)
A0A3B6NIJ6_WHEAT (2)
A0A3B6TL76_WHEAT (2)
A0A3B5Z2N0_WHEAT (2)
A0A2X0TY93_WHEAT (2)
A0A077S025_WHEAT (2)
A0A3B6C1S1_WHEAT (2)
A0A3B6TFL6_WHEAT (2)
A0A3B6MSU8_WHEAT (2)
4565.Traes_6AS_5027732B8.1 (2)
4565.Traes_2DL_CDE00B235.1 (2)
4565.Traes_3DL_A62754CCA.2 (2)
A0A3B5ZYX7_WHEAT (2)
4565.Traes_3AL_5027B584C.1 (2)
A0A3B6JFJ4_WHEAT (2)
4565.Traes_7DS_BDB4C8447.2 (2)
A0A3B6QK15_WHEAT (2)
A0A3B5ZRV7_WHEAT (2)
4565.Traes_6AS_9C46FA129.1 (2)
4565.Traes_5BL_A939C0E65.1 (2)
4565.Traes_4BL_3EFFEDE44.1 (2)
A0A3B6CEE9_WHEAT (2)
A0A3B6IQ66_WHEAT (2)
A0A3B6LYY0_WHEAT (2)
A0A3B6S8P4_WHEAT (2)
4565.Traes_2BS_6249E432F.4 (2)
4565.Traes_7AS_0B2600841.1 (2)

CHEBI ID

CHEBI:15428 (6)
CHEBI:73024 (6)
CHEBI:15891 (6)
CHEBI:27897 (6)
CHEBI:26271 (5)
CHEBI:16856 (5)
CHEBI:18257 (5)
CHEBI:28867 (5)
CHEBI:25017 (5)
CHEBI:17750 (5)
CHEBI:16467 (5)
CHEBI:16737 (5)
CHEBI:15354 (5)
CHEBI:64549 (4)
CHEBI:64566 (4)
CHEBI:64561 (4)
CHEBI:64568 (4)
CHEBI:17822 (4)
CHEBI:25094 (4)
CHEBI:18237 (4)
CHEBI:16040 (4)
CHEBI:16811 (4)
CHEBI:18295 (4)
CHEBI:64489 (4)
CHEBI:16610 (4)
CHEBI:28044 (4)
CHEBI:16865 (4)
CHEBI:17196 (4)
CHEBI:16196 (4)
CHEBI:73067 (4)

Metabolite Name

Pantothenic acid (10)
L-Tryptophan (10)
L-Tyrosine (10)
L-Arginine (9)
Adenosine (9)
L-Aspartic acid (7)
Glutathione (7)
5-Hydroxyindoleacetic acid (7)
L-Threonine (7)
L-Histidine (7)
Choline (7)
Citric acid (7)
Guanine (7)
Palmitic acid (7)
Adenine (7)
Uric acid (7)
Uridine (7)
Sucrose (7)
Creatinine (7)
L-Phenylalanine (7)
1-Methylnicotinamide (6)
Eicosadienoic acid (6)
S-Adenosylhomocysteine (6)
Thymine (6)
Pyroglutamic acid (6)
Gamma-Aminobutyric acid (6)
Succinic acid (6)
Undecanedioic acid (6)
L-Glutamic acid (6)
Taurine (6)

First Public Date

2023 (24)
2014 (21)
2025 (14)
2022 (14)
2020 (13)
2017 (10)
2026 (8)
2021 (8)
2019 (5)
2018 (5)
2024 (4)
2013 (4)
2015 (3)
2016 (1)

Classification

protozoa (2)

Study type

Transcription profiling by array (160)
RNA-seq of coding RNA (62)
ChIP-seq (29)
Other (18)
RNA-seq of non coding RNA (9)
RNA-seq of coding RNA from single cells (8)
RNA-seq of total RNA (6)
ATAC-seq (4)
Spatial transcriptomics by high-throughput sequencing (3)
Methylation profiling by array (3)
RIP-chip by array (2)
Baseline (1)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Animal - Single-cell sequencing (1)
Cell line - One-color microarray (1)
Translation profiling (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Capture-C (1)
CLIP-seq (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
Bisulfite-seq (1)
Hi-C (1)
RIP-seq (1)
Single nucleus RNA sequencing (1)
MicroRNA profiling by array (1)
DNA-seq (1)
CUT&RUN (1)

Release Date

2015 (57)
2014 (48)
2011 (45)
2013 (44)
2016 (40)
2012 (34)
2025 (29)
2022 (26)
2023 (24)
2020 (23)
2019 (21)
2024 (19)
2021 (19)
2017 (18)
2010 (16)
2018 (14)
2009 (13)
2008 (13)
2026 (12)
2007 (7)
2005 (3)
2006 (2)
2002 (2)
1999 (2)
2004 (1)
2001 (1)

Lab affiliation

Max Planck Institute of Immunobiology and Epigenetics Proteomics Unit Stuebeweg 51 79108 Freiburg, Germany (1)
Northwestern University (1)
Wayne State University School of Medicine Department of Physiology (1)
Motor Neuron Disease Research Centre, Macquarie University, Macquarie Park NSW 2109 Australia (1)

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ELAV ChIP-seq in Drosophila melanogaster embryos

Alternative polyadenylation (APA) has been implicated in a variety of developmental and disease processes, such as stem cell differentiation and cancer. A particularly dramatic form of APA has been documented in the developing nervous system of flies and mammals, whereby a variety of neurogenic gene...

ORGANISM(S): Drosophila melanogaster

2014-11-21 | E-GEOD-63323 | biostudies-arrayexpress

ELAV proteomics after brain ischemia and reperfusion in the rat

We investigated mRNA regulatory proteins of the ELAV family following 10 min global brain ischemia and 8 hrs reperfusion (8R) or non-ischemic controls (NIC) in rat hippocampal CA1 and CA3. There were three main experiments: (1) Shot-gun proteomics of polysome pellets from NIC and 8R CA1 and CA3, (2)...

ORGANISM(S): Rattus norvegicus (Rat)

2016-07-07 | PXD004078 | Pride

Phenotypic activation and repression of three ELAV-like proteins in Trypanosoma brucei

Three potential ELAV-like proteins of T. brucei, including Tb927.3.2930, Tb927.7.5380, and Tb927.8.6650, were either inhibited by RNAi or phenotypically activated by over-expression, followed by microarray analysis of the transcriptome. The results indicated that these ELAV-like proteins regulate th...

ORGANISM(S): Trypanosoma brucei

2013-04-18 | E-GEOD-46161 | biostudies-arrayexpress

ELAV mediates circular RNA biogenesis in neurons [RNA-Seq]

PRJNA1260000 | ENA

ELAV mediates circular RNA biogenesis in neurons [RIP-seq]

PRJNA1118328 | ENA

ELAV mediates circular RNA biogenesis in neurons [RNA-seq, S2]

PRJNA1118332 | ENA

ELAV mediates circular RNA biogenesis in neurons [RNA-seq, dm]

PRJNA1118331 | ENA

ELAV mediates circular RNA biogenesis in neurons [RNA-seq, RNaseR]

PRJNA1118333 | ENA

ELAV mediates circular RNA biogenesis in neurons [RNA-seq, sm]

PRJNA1118330 | ENA

RIP-Seq analysis of Trypanosoma brucei ELAV-like protein Tb927.8.6650

A tagged ectopic version of the ELAV-like protein Tb927.8.6650 of T. brucei was expressed in stable cell lines and pulled down. Co-purifying transcripts were analyzed by sequencing to identify RNAs associated with Tb927.8.6650. Stable procyclic form cell lines expressing tetracycline-inducible TAP-t...

ORGANISM(S): Trypanosoma brucei

2013-04-18 | E-GEOD-46160 | biostudies-arrayexpress

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845 Results

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