Elephant - OmicsDI

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Unknown (1030)
Genomics (238)
Proteomics (19)
Transcriptomics (12)
Metabolomics (5)
Methylation profiling (1)
Other (1)

Organisms

Schizophyllum commune H4-8 (11)
Mycobacterium tuberculosis SP7 (11)
Oryza sativa Japonica Group (11)
Crotalus durissus terrificus (11)
Eriocheir sinensis (11)
Candidatus Endoriftia persephonae (11)
Mycobacterium tuberculosis SP10 (11)
Mycobacterium tuberculosis SP13 (11)
Loxodonta africana (6)
Elephas maximus (5)
Mammuthus primigenius (3)
Rattus norvegicus (2)
Mirounga angustirostris (2)
Elephas maximus indicus (2)
Cenchrus purpureus (1)
Tenrec ecaudatus (1)
Procavia capensis (1)
Callorhinchus milii (1)
Monodelphis domestica (1)
Callithrix jacchus (1)
Equus asinus (1)
Cavia porcellus (1)
Notamacropus eugenii (1)
Bos taurus (1)
Solanum lycopersicum (1)
Mus musculus (1)
Homo sapiens (1)
'Pennisetum purpureum' phytoplasma (1)
Loxodonta cyclotis (1)
cellular organisms (1)

Organisms

Elephas maximus (10)
Loxodonta africana (9)
gut metagenome (6)
Callorhinchus milii (5)
Elephas maximus indicus (5)
Mirounga angustirostris (5)
Deilephila elpenor (4)
Deilephila porcellus (4)
fossil metagenome (4)
Agelas clathrodes (4)
Rhynchocyon petersi (3)
Cenchrus purpureus (3)
feces metagenome (3)
Ureaplasma miroungigenitalium (2)
Elephantulus edwardii (2)
Anomalopteryx didiformis (2)
Elephantid betaherpesvirus 1 (2)
biogas fermenter metagenome (2)
Mycobacterium tuberculosis (2)
marine metagenome (2)
Escherichia coli (2)
Homo sapiens (2)
Palaeognathae (1)
Ureaplasma sp. ES3154-GEN (1)
Elephas maximus maximus (1)
Corynebacterium sp. ES2794-CONJ1 (1)
Corynebacterium sp. ES2715-CONJ3 (1)
Mycolicibacterium elephantis DSM 44368 (1)
Loxodonta cyclotis (1)
Mirounga leonina (1)

Repository

ENA (234)
geo (12)
pride (11)
biostudies-arrayexpress (4)
GNPS (4)
MassIVE (4)
jPOST (3)
EVA (2)
iProX (1)
MetaboLights (1)

Tissue

Dentin (2)
Bone (2)
Extracellular matrix (1)
Long bone (1)
Eggshell (1)
Skin (1)
Muscle (1)
Embryonic cell (1)
Bone marrow (1)
Blood serum (1)
Skeletal muscle (1)
HeLa cell (1)
Epithelial cell (1)
Cell culture (1)

Disease

Cervix carcinoma (1)

Technology Type

Mass Spectrometry (11)
Shotgun proteomics (6)
Bottom-up proteomics (3)
Mass spectrometry assay (1)
SWATH MS (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Data-dependent acquisition (1)

Instrument Platform

Orbitrap Exploris 240 (3)
Orbitrap Fusion (3)
- (1)
Illumina NovaSeq 6000 (1)
Pegasus (1)
Orbitrap Fusion ETD (1)
Liquid Chromatography MS - (1)

Publication Date

2014 (6)
2024 (6)
2026 (6)
2025 (4)
2020 (3)
2019 (3)
2023 (3)
2021 (2)
2018 (2)
2011 (1)
2017 (1)
2022 (1)
2013 (1)

Metabolite Name

Trans dehydrorosinone (1)
2-[(3,4-dihydroxy-2-oxo-5-phosphonatooxypentyl)amino]benzoate (1)
(2R)-2-hydroxy-N-[(2S,3S,4R)-1,3,4-trihydroxyoctadecan-2-yl]hexadecanamide (1)
2-amino-4-(S-butylsulfonimidoyl)butanoate (1)
4-Hydroxy-3-all-trans-heptaprenylbenzoate (1)
D-glycero-D-altro-octulose 8-phosphate (1)
Glu-Gly-Trp (1)
(2,3-Dihydroxy-4-oxo-5-phosphonatooxypentyl) phosphate (1)
2-acetamido-2-deoxy-3-O-(4-deoxy-alpha-L-threo-hex-4-enopyranosyluronate)-4-O-sulfonato-beta-D-galactopyranose(2-) (1)
4-[5-(benzylsulfanyl)-4-methyl-4H-1,2,4-triazol-3-yl]aniline (1)
Phe-Pro-Ala (1)
4-Hydroxy-2-(1-methylethenyl)-2,3-dihydrobenzofuran-5-carboxylic acid (1)
Oxidized Watasenia luciferin(2-) (1)
13-(2-Methylcrotonoyl)oxylupinine (1)
N-[(1R,2R)-1-hydroxy-3-(4-morpholinyl)-1-phenylpropan-2-yl]decanamide (1)
13-[O(2')-beta-D-glucopyranosyl-beta-D-glucopyranosyloxy]docosanoate (1)
3,6,7,8-Tetrahydroxy-2-naphthoate (1)
8-(3,3-DMA)-3-methylgalangin (1)
Precorrin-2(7-) (1)
4-Oxooctadeca-9,11,13-trienoic acid (1)
His-Gln-Lys (1)
7alpha,12beta-Dihydroxy-5alpha-cholan-24-oic Acid (1)
Nonic acid (1)
5S-Hydroperoxy-18R-hydroxy-6E,8Z,11Z,14Z,16E-eicosapentaenoic acid (1)
(1R,3S,9R,10S,13R,15E,17E,19E,21E,23R,25S,26R,27S)-23-[(2R,3S,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl]oxy-10-ethyl-1,3,9,27-tetrahydroxy-13-methyl-7,11-dioxo-12,29-dioxabicyclo[23.3.1]nonacosa-15,17,19,21-tetraene-26-carboxylic acid (1)
20,21-diprenylterpendole J (1)
Callicarpone (1)
5-Hydroxypseudobaptigenin (1)
9H-Pyrrolo[1',2':2,3]isoindolo[4,5,6-cd]indol-9-one, 10-acetyl-2,6,6a,7,11a,11b-hexahydro-11-hydroxy-7,7-dimethyl-, (6aR,11aS,11bR)- (1)
2,6-Bis(3-methyl-2-butenyl)-4-acetylphenol (1)

First Public Date

2024 (30)
2025 (29)
2023 (29)
2026 (24)
2022 (24)
2021 (20)
2019 (18)
2013 (14)
2020 (13)
2017 (9)
2018 (8)
2014 (8)
2016 (4)
2015 (3)
2012 (1)

Classification

bacteria (13)
viruses (3)

Study type

RNA-seq of coding RNA (3)
Transcription profiling by array (1)

Release Date

2025 (121)
2022 (110)
2024 (105)
2021 (105)
2023 (101)
2020 (85)
2019 (64)
2018 (64)
2017 (38)
2016 (38)
2014 (37)
2015 (36)
2013 (26)
2026 (17)
2009 (16)
2012 (12)
2007 (12)
2010 (11)
2011 (10)
2008 (8)
2006 (8)
2001 (4)
2002 (2)
2004 (1)
2003 (1)
2000 (1)
1998 (1)

Lab affiliation

Bioengineering (1)
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark (1)
Institute of Advanced Technology, Kindai University (1)
Centre for GeoGenetics (1)
1 Univ. Bordeaux, CNRS, Bordeaux INP, CBMN, UMR 5248, F-33600 Pessac, France 2 Bordeaux Proteome Platform, University of Bordeaux, F-33000 Bordeaux, France (1)
Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark (1)
Department of Life Sciences and Systems Biology University of Turin Italy (1)
ProGenTomics, Laboratory of Pharmaceutical Biotechnology, Faculty of Pharmaceutical Sciences, Ghent University, Belgium (1)
Proteomics Lab. IREC (CSIC-UCLM-JCCM). 13005 - Ciudad Real. Spain (1)
Proteomics, Metabolomics & Mass Spectrometry Laboratory, Institute for the Animal Production System in the Mediterranean Environment (ISPAAM), National Research Council, Piazzale Enrico Fermi 1, 80055 Portici (NA), Italy (1)
Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France (1)

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Molecular characterisation of adipose tissue in the African elephant (Loxodonta africana)

The African elephant (Loxodonta africana) is experiencing serious challenges to optimal reproduction in captivity. The physiological and molecular basis of this impaired fertility remains unknown. A functional link between nutritional status, body condition score and fertility is well established in...

ORGANISM(S): Loxodonta africana

2014-05-22 | E-MTAB-2024 | biostudies-arrayexpress

Elephant iPSC

Elephant iPSC Direct RNA Sequencing

PRJEB86316 | ENA

Mirounga angustirostris strain:northern elephant seal

Mirounga angustirostris strain:northern elephant seal Transcriptome or Gene expression

PRJNA258305 | ENA

Changing trends in elephant camp management in northern Thailand and implications for welfare.

Not available

S-EPMC6254247 | biostudies-literature

Patterns and determinants of elephant attacks on humans in Nepal.

Not available

S-EPMC8427586 | biostudies-literature

Elephant Head Dry Permafrost

Elephant Head Dry Permafrost Microbiota

PRJNA922518 | ENA

Origins and functional evolution of Y chromosome gene repertoires across the class Mammalia

We collected (Illumina) RNA-seq data (polyadenylated RNA fraction) for a number of tissue samples from common marmoset and elephant. We developed a subtraction approach based on male/female RNA-seq data, Illumina genomic data and available genomes to identify and assemble Y transcripts. For marmoset...

ORGANISM(S): Loxodonta africana

2014-04-15 | E-GEOD-50747 | biostudies-arrayexpress

DNA Damage Response in Elephant Cells

The identity of most functional elements in the mammalian genome and the phenotypes they impact are unclear. Here, we perform a genome-wide comparative analysis of patterns of accelerated evolution in species with highly distinctive traits to discover candidate functional elements for clinically imp...

ORGANISM(S): Loxodonta africana

2018-01-01 | GSE107117 | GEO

Time-series analysis for forecasting monthly workload at two elephant hospitals in Thailand.

Not available

S-EPMC12752977 | biostudies-literature

Quantitative LC-MSMS of Southern elephant seal muscles

Southern elephant seals (Mirounga leonine) are marine mammals with extreme diving profiles (300m to 1000m deep for 20 to 30 min). These apnea dives raise the question of muscular adaptations to hypoxia, as the muscles are particularly solicited during these dives. Moreover, exposure to hypoxia follo...

ORGANISM(S): Mirounga leonina

2025-03-17 | PXD048683 | Pride

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