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ProteomicsDay-night phosphoproteome analysis in WT, pgm mutant and sweet11/sweet12 mutant
In this progect, we anallyzed the phosphoproteome change of shoot and root from WT pgm mutant and sweet11/sweet12 mutant at the end of day and the end of night. The purpose is to understand the role of sugar distribution in shoot and root phopshoproteome.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-08-12 | PXD031942 | Pride
End of day Pgm End of night Sweet1/sweet12 Membrane fraction Arabidopsis shoot/root 
TranscriptomicsTime-of-day-dependent light-induction of gene expression in the chicken pineal gland
Light has a strong effect on whole organism physiology, such as the circadian rhythms that are phase delayed and advanced by light given at early and late subjective night, respectively. Despite the importance of the phase-dependent light responses, little is known about the underlying molecular mec...
ORGANISM(S): Gallus gallus 
2011-03-08 | E-GEOD-21915 | biostudies-arrayexpress
GenomicsRNA seq of Arabidopsis Class II TPS mutants compared to wt, in ZT4, ED (end of day), EN (end of night) and ExtN (extended night)
RNA seq of Arabidopsis Class II TPS mutants compared to wt, in ZT4, ED (end of day), EN (end of night) and ExtN (extended night)
PRJEB60442 | ENA
ProteomicsA.thaliana - Rosette, End of night, SC (Reiland,plant_physiology,2009)
abundance based on Spectral counting EN, end of night, Interaction consistency score: 6.7, Coverage: 9
ORGANISM(S): 3702 
2009-00-00 | 514570011 | PAXDB
ProteomicsProteome analysis of Arabidopsis thaliana circadian clock mutants
The circadian clock is comprised of proteins that form negative feedback loops, which regulate the timing of global gene expression in a coordinated 24 hour cycle. As a result, the plant circadian clock is responsible for regulating numerous physiological processes central to growth and survival. To...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2018-01-02 | PXD004763 | Pride
Arabidopsis thaliana End of day End of night Circadian clock Shotgun Proteome 
TranscriptomicsTranscription profiling by tiling array of Arabidopsis thaliana leaf growth and development
Transcriptome changes during leaf growth and development were profiled. We extracted RNA from Arabidopsis leaf number six from plants growing in stable and controlled experimental conditions at four different growth stages both at the end-of-day (EOD) and end-of-night (EON). The experiment was perfo...
ORGANISM(S): Arabidopsis thaliana 
2012-12-12 | E-MTAB-1056 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis thaliana rosettes IN an extended night
Usually starch is nearly depleted at the end of the night. To induce a gradual depletion of carbon, we have analysed the global response of transcripts during an extension of the night, where carbon becomes severely limiting from about four hours onwards. Experiment Overall Design: Arabidopsis thali...
ORGANISM(S): Arabidopsis thaliana 
2008-04-09 | E-GEOD-10016 | biostudies-arrayexpress
GenomicsGene expression study of 21d old Col-0 and tpt-2 shifted at the end of night to 500µmol photons m-2 s-1 for 9h and 18h
Gene expression study of 21d old Col-0 and tpt-2 shifted at the end of night to 500µmol photons m-2 s-1 for 9h and 18h
PRJNA803178 | ENA
TranscriptomicsExpression data of Arabidopsis thaliana rosettes in an extended night
Usually starch is nearly depleted at the end of the night. To induce a gradual depletion of carbon, we have analysed the global response of transcripts during an extension of the night, where carbon becomes severely limiting from about four hours onwards. Keywords: time course
ORGANISM(S): Arabidopsis thaliana 
2008-02-14 | GSE10016 | GEO
GenomicsChIP-seq profiling of histone modifications (H3K4me3, H3K9ac, and H3K27me3) in seedling shoot tissues from 10 barley genotypes
ChIP-seq was performed to characterize histone modification landscapes and to enable comparative epigenomic analyses across the barley pangenome. Leaf tissues from seedling shoots of 10 barley genotypes were collected from plants grown under controlled conditions (16 h light/8 h dark, 20°C day/16°C ...
ORGANISM(S): Hordeum vulgare subsp. spontaneum 
2026-07-12 | E-MTAB-17344 | biostudies-arrayexpress
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