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TranscriptomicsIdentifying Sites Bound by Epstein Barr Nuclear Antigen 1 (EBNA1) in the Human Genome
Epstein-Barr virus (EBV) is a ubiquitous gammaherpes virus that establishes a life-long latency in over 90% of the world's population. Epstein Barr Nuclear Antigen 1, EBNA1, is the only viral protein consistently detected in all viral latency programs, as well as in all forms of EBV-associated malig...
ORGANISM(S): Homo sapiens 
2010-05-14 | E-GEOD-13315 | biostudies-arrayexpress
UnknownIn Silico Modeling and Characterization of Epstein-Barr Virus Latent Membrane Protein 1 Protein.
Not available
S-EPMC11656244 | biostudies-literature
TranscriptomicsmicroRNA Targetome Analysis of Latently KSHV-infected Primary Effusion Lymphoma Cell lines Using PAR-CLIP [Illumina]
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and, often, EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in viral latency and lymphomagenesis. Here we ...
ORGANISM(S): Homo sapiens 
2011-11-16 | E-GEOD-32109 | biostudies-arrayexpress
TranscriptomicsThe multifaceted RisA regulon of Bordetella pertussis
Bordetella pertussis, the etiological agent of whooping cough, regulates the expression of its virulence factors by the well-defined BvgA/S two-component regulatory system. Phosphorylated BvgA activates the virulence activated genes (vags) and represses via the activation of the bvgR gene the expres...
ORGANISM(S): Bordetella pertussis 
2016-08-20 | E-GEOD-77754 | biostudies-arrayexpress
TranscriptomicsGene expression patterns of sulfur starvation in Synechocystis sp. PCC 6803
The unicellular cyanobacterium Synechocystis sp. PCC 6803 is a model system for studying biochemistry, genetics and molecular biology of photobiological processes. Despite its importance in basic and applied research, the genome-wide picture of transcriptional regulation in this bacterium is limited...
ORGANISM(S): Synechocystis sp. PCC 6803 
2008-07-24 | E-GEOD-11970 | biostudies-arrayexpress
UnknownNovel eukaryotes from the permanently anoxic Cariaco Basin (Caribbean Sea).
Not available
S-EPMC194984 | biostudies-literature
Transcriptomicsaffy-agro-bi-medicago-AGRO-BI-Toulouse
affy_agro-bi_medicago - Identification of genes from the model legume Medicago truncatula whose expression is affected by the plant nitrogen status, with or without inoculation with the symbiotic bacteria Sinorhizobium meliloti. - Comparison of the supernodulant, nitrogen-insensitive, sunn-2 mutant ...
ORGANISM(S): Medicago truncatula 
2010-10-28 | E-GEOD-17253 | biostudies-arrayexpress
TranscriptomicsThe Streptomyces lividans lsp mutant
The Streptomyces lividans lsp gene encodes a type II signal peptidase (Lsp) that cleaves the type II leader peptides of lipoproteins. Transcriptional profiling of the bacterium depleted of the lsp gene mainly resulted in deactivation of the sigma U regulon, as well as in downregulation of genes invo...
ORGANISM(S): Streptomyces lividans 
2014-05-22 | E-GEOD-30728 | biostudies-arrayexpress
UnknownPD-1 blockade and radiotherapy combination for advanced Epstein-Barr virus-associated intrahepatic cholangiocarcinoma: a case report and literature review.
Not available
S-EPMC10518395 | biostudies-literature
TranscriptomicsSchizosaccharomyces pombe ployg mutant cells expression profile.
Expression profiles of polg mutant cells reveal that many genes encoding proteins involved in cell wall biogenesis and stress response are induced, suggesting that polg mutant cells attempt to maintain growth potential and undergo extensive oxidative metabolism. Conversely, many genes encoding prot...
ORGANISM(S): Schizosaccharomyces pombe 
2007-09-28 | E-GEOD-5941 | biostudies-arrayexpress
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