Ev proteomics - OmicsDI

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Proteomics (2377)
Unknown (584)
Metabolomics (66)
Genomics (42)
Transcriptomics (21)
Other (2)

Organisms

Allexis (1869)
Arabidopsis thaliana (1869)
Homo sapiens (1869)
Mus musculus (1869)
Rattus norvegicus (1869)
Saccharomyces cerevisiae (1869)
Entamoeba histolytica HM-1:IMSS-A (1868)
Escherichia coli (1868)
Homo sapiens (107)
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Ovis aries (2)
Aedes aegypti (2)
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Nicotiana benthamiana (1)
Oryctolagus cuniculus (1)
Rattus rattus (1)
Shewanella oneidensis MR-1 (1)
Solanum lycopersicum (1)
Staphylococcus aureus subsp. aureus RN4220 (1)
Vibrio natriegens (1)
cellular organisms (1)
Mycobacterium tuberculosis (1)
Notata (1)
Pseudomonas aeruginosa (1)
Sarcandra glabra (1)
Gallus gallus (1)
Human betaherpesvirus 5 (1)
Macaca fascicularis (1)

Organisms

Homo sapiens (22)
Mus musculus (8)
Ovis aries (1)

Repository

pride (1869)
PeptideAtlas (281)
MassIVE (112)
iProX (70)
MetaboLights (65)
ENA (38)
jPOST (34)
geo (25)
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biostudies-arrayexpress (3)
GNPS (1)
GPMDB (1)

Tissue

Cell culture (373)
Blood plasma (112)
Epithelial cell (110)
Brain (105)
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Permanent cell line cell (50)
Blood (48)
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Blood serum (45)
Extracellular vesicle (39)
Lung (36)
Urine (35)
Cell suspension culture (33)
Stem cell (33)
Fibroblast (32)
Heart (32)
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Blood cell (29)
Plant cell (29)
Kidney (26)
Macrophage (26)
Skin (24)
Whole body (23)
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Primary cell (21)
Bone marrow (20)
Cerebrospinal fluid (19)
Colon (18)
Embryonic stem cell (16)
Others (1)

Disease

Breast cancer (64)
Disease free (48)
Colon cancer (30)
Acute leukemia (22)
Brain glioblastoma multiforme (16)
COVID-19 (14)
Malignant neoplasm of ovary (13)
Alzheimer's disease (12)
Prostate adenocarcinoma (12)
Brain cancer (10)
Cardiovascular system disease (9)
Cervix carcinoma (9)
Glioblastoma (9)
Parkinson's disease (9)
Wounds and Injuries (9)
Melanoma (8)
Type 2 diabetes mellitus (8)
Multiple sclerosis (7)
Hepatocellular carcinoma (6)
Multiple myeloma (6)
Pancreatic ductal adenocarcinoma (6)
Prostate cancer (6)
Urinary bladder cancer (6)
Lung cancer (5)
Lymphoma (5)
Neuroblastoma (5)
Obesity (5)
Osteoarthritis (5)
Plasmodium falciparum malaria (4)
Not Available (1)

Technology Type

Mass Spectrometry (1869)
Shotgun proteomics (878)
Bottom-up proteomics (448)
Data-independent acquisition (248)
Data-dependent acquisition (225)
SWATH MS (104)
Gel-based experiment (97)
Affinity purification coupled with mass spectrometry proteomics (94)
Top-down proteomics (59)
Mass spectrometry (57)
DiaPASEF (46)
HDMSE (43)
MSE (34)
Chemical cross-linking coupled with mass spectrometry proteomics (26)
All-ion fragmentation (19)
SRM/MRM (18)
Affinity proteomics (9)
Mass spectrometry assay (8)
Immunopeptidomics (4)
Proteogenomics (4)
NMR spectroscopy (1)
Glycoproteomics (1)
Mass spectrometry imaging (1)
Metaproteomics (1)

Instrument Platform

LTQ Orbitrap Velos (19)
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Xevo G2 Q-Tof (4)
MaXis (2)
Orbitrap Q Exactive HF-X (2)
TripleTOF 5600 (2)
Illumina HiSeq 4000 (1)
Instrument (1)
6495C Triple Quadrupole LC/MS (1)
6520B Q-TOF LC/MS (1)
6530A Q-TOF LC/MS (1)
6550 iFunnel Q-TOF LC/MS (1)
Bruker Impact II Q-TOF (1)
IQ-X Orbitrap (1)
Impact HD UHR-QqTOF-MS (1)
LC-MS/MS (1)
LTQ Orbitrap (1)
Orbitrap Fusion Tribrid (Thermo Scientific instrument model) (1)
Pegasus 4D GCxGC-TOF MS (Leco) (1)
Q-Exactive (1)
QTRAP 4500 (1)
SYNAPT G2-Si (1)

Publication Date

2025 (464)
2024 (308)
2023 (293)
2026 (292)
2022 (218)
2021 (163)
2020 (126)
2019 (108)
2018 (71)
2017 (43)
2014 (25)
2016 (21)
2015 (14)
2012 (1)

UNIPROT ID/AC

F1RUN2 (279)
F1RII7 (276)
Q6QAQ1 (272)
C7AI81 (271)
P00355 (271)
P09571 (270)
F1RGX4 (269)
I3LK59 (267)
D0G7F6 (265)
P04246 (263)
F1RFY2 (262)
F1RKG8 (258)
P02554 (258)
Q7SIB7 (258)
F1SA70 (257)
P00346 (256)
A5A8V7 (253)
I3LL80 (253)
F1RII4 (252)
P00503 (252)
P04178 (252)
O02705 (251)
F1S8Y5 (250)
F1S814 (249)
F1SRC5 (249)
F1SDR7 (248)
F1SDX9 (248)
F1SR80 (248)
I3L7U0 (248)
Q6RI85 (248)

ENSEMBL ID

ENSSSCG00000030893 (4)
ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:15428 (19)
CHEBI:30769 (19)
CHEBI:28044 (17)
CHEBI:18012 (16)
CHEBI:16708 (15)
CHEBI:26271 (14)
CHEBI:28300 (14)
CHEBI:15741 (14)
CHEBI:16449 (14)
CHEBI:30915 (14)
CHEBI:27897 (14)
CHEBI:15756 (14)
CHEBI:17822 (13)
CHEBI:22660 (13)
CHEBI:18186 (13)
CHEBI:16335 (13)
CHEBI:7916 (13)
CHEBI:16704 (13)
CHEBI:16857 (13)
CHEBI:16811 (12)
CHEBI:18257 (12)
CHEBI:6650 (12)
CHEBI:17154 (12)
CHEBI:27266 (12)
CHEBI:15891 (12)
CHEBI:18183 (12)
CHEBI:16015 (12)
CHEBI:26078 (12)
CHEBI:33508 (11)
CHEBI:25094 (11)

Metabolite Name

Adenine (15)
Hypoxanthine (12)
Uracil (11)
Adenosine (11)
Uridine (11)
Pyroglutamic acid (10)
Ornithine (10)
Phenylalanine (10)
Glycine (9)
Succinic acid (9)
Glyceric acid (9)
Spermidine (9)
Alanine (9)
Guanosine (9)
Creatinine (9)
Creatine (9)
L-Phenylalanine (9)
Leucine (8)
Betaine (8)
L-Arginine (8)
Methionine (8)
Citric acid (8)
Guanine (8)
Cytosine (8)
Azelaic acid (8)
Glutamic acid (8)
Aspartic acid (8)
Sucrose (8)
L-Valine (8)
L-Tyrosine (8)

First Public Date

2025 (16)
2024 (6)
2026 (5)
2023 (2)
2021 (2)
2020 (2)
2018 (2)
2022 (1)
2017 (1)
2015 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (3)
2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)
Not available (2)
15.99491 (1)
4x(2)H labeled dimethylated residue (1)
57.02146 (1)

Study type

RNA-seq of coding RNA (2)
Transcription profiling by array (1)

Release Date

2025 (107)
2023 (81)
2024 (70)
2021 (65)
2022 (63)
2020 (54)
2019 (37)
2018 (26)
2026 (19)
2017 (15)
2016 (14)
2015 (9)
2014 (7)
2012 (5)
2011 (4)
2008 (4)
2010 (3)
2013 (2)
2009 (1)
2004 (1)

Lab affiliation

University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (12)
Head of the Curie Institute Mass Spectrometry Platform (9)
Head of Proteomics (7)
1VIB-UGent Center for Medical Biotechnology, VIB, 9052 Ghent, Belgium 2Department of Biomolecular Medicine, Ghent University, 9052 Ghent, Belgium (5)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (5)
Brigham and Women's Hospital, Harvard Medical School (5)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (5)
School of Pharmacy, Sungkyunkwan University, South Korea (5)
Biochemistry and molecular biology department, Universidade Federal de Goias, Brazil (4)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (4)
Fudan University (4)
Laboratory of Experimental Cancer Research, Department of Human Structure and Repair, Ghent University, Ghent, Belgium (4)
Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
The University of Melbourne (4)
University of Washington (4)
Utrecht University (4)
Vanderbilt University Proteomics Core (4)
Zhejiang University (4)
Baker Heart and Diabetes Institute (3)
Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia, Canada (3)
CRUK Beatson Institute, Switchback Road, Glasgow G61 1BD, UK. (3)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (3)
Department of Chemistry & Bioscience Aalborg University Denmark (3)
Department of Chemistry and Biomolecular Sciences, University of Ottawa, Canada (3)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (3)
Dpt. of Immunobiology University of Lausanne (UNIL), Boveresses 155 CH-1066 Epalinges (3)
Federal University of Goias (3)
Head of System Biology Lab. at Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Russia (3)
MS Omics, Biohub Chicago, USA (3)
Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen (3)

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A new perspective on semen quality of aged male: The characteristics of metabolomics and proteomics

BACKGROUND: Semen quality is negatively correlated with male age and is mainly quantified by a routine semen analysis, which is descriptive and inconclusive. Sperm proteins or semen metabolites are used as the intermediate or end-products, reflecting changes in semen quality, an...

2024-01-16 | MTBLS5289 | MetaboLights

Integrated Proteomics and Metabolomics Analysis Reveals Differential Lipid Metabolism in HUVEC under high and low shear stress

OBJECTIVE: Atherosclerotic plaque development is closely associated with the hemodynamic forces applied to endothelial cells (EC). Among these, shear stress (SS) plays a key role in disease development since changes in flow intensity and direction could stimulate an atheroprone or athero...

2019-07-25 | MTBLS739 | MetaboLights

Proteomics and metabolomics analysis based on exosomes revealed the response mechanism of Alicyclobacillus acidoterrestris to acid stress

Bacteria secrete exosomes containing stress-related molecules such as proteins and nucleic acids, which facilitate adaptation to challenging environments. In order to elucidate the role of A. acidoterrestris exosomes in its acid stress response, this study combined proteomics and metabolomics to ...

2025-09-13 | MTBLS12995 | MetaboLights

Proteomics and metabolomics analysis based on exosomes revealed the response mechanism of Alicyclobacillus acidoterrestris to acid stress

2025-09-14 | MTBLS12996 | MetaboLights

Molecular investigation of Tuscan sweet cherries sampled over three years: gene expression analysis coupled to metabolomics and proteomics

Sweet cherry (Prunus avium L.) is a stone fruit widely consumed and appreciated for its organoleptic properties, as well as its nutraceutical potential. We here investigated the characteristics of six non-commercial Tuscan varieties of sweet cherry maintained at the Regional Germplasm Ba...

2021-10-29 | MTBLS1803 | MetaboLights

Serum proteomics and metabolomics reveal novel noninvasive molecular signatures for hepatocellular carcinoma diagnosis

This study aimed to identify and validate noninvasive serum protein and metabolite biomarkers for the early detection and prognostic assessment of hepatocellular carcinoma (HCC).In this study, we systematically analyzed serum proteomics and metabolomics across four cohorts, including healthy control...

2026-04-10 | MTBLS14248 | MetaboLights

Metabolomics and Proteomics Reveal the Inhibitory Effect of Lactobacillus crispatus on Cervical Cancer Cells

Cervical cancer remains a significant global health issue due to its high morbidity and mortality rates. Recently, Lactobacillus crispatus has been recognized for its crucial role in maintaining cervical health. While some studies have explored the use of L. crispatus to mitigate cervical cancer, th...

2024-09-05 | MTBLS10498 | MetaboLights

Rat EV proteins isolated from different tissues

Isolation and chrecterization of EV proteins in different organs.

ORGANISM(S): Rattus norvegicus (Rat)

2022-02-15 | PXD020568 | Pride

Ev Rat

Proteomics in Practice: A Case Study Highlighting Tandem Mass Tag-Based MS for Quantitative Profiling of Extracellular Vesicles and Application to Irradiated Fibroblasts.

Not available

S-EPMC12934204 | biostudies-literature

Extracellular vesicles (EV) from IFNγ-primed cardiosphere-derived cells (CDCs)

Characterization of proteins in extracellular vesicles (EV) from cardiosphere-derived cells (CDCs) of a clinically relevant pig model. Additionally, considering that priming stem cells with inflammatory stimuli may increase the therapeutic potential of released vesicles, here we studied the dynamic ...

ORGANISM(S): Sus scrofa domesticus (domestic pig)

2020-05-15 | PXD016434 | Pride

Ev Cdcs Ifnγ Pig Lc-ms/ms

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3092 Results

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Organisms

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BACKGROUND: Semen quality is negatively correlated with male age and is mainly quantified by a routine semen analysis, which is descriptive and inconclusive. Sperm proteins or semen metabolites are used as the intermediate or end-products, reflecting changes in semen quality, an...

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