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Unknown (1165)
Transcriptomics (15)
Proteomics (13)
Metabolomics (8)
Genomics (6)
Genomic (1)

Organisms

Homo sapiens (17)
Saccharomyces cerevisiae (4)
Caenorhabditis elegans (4)
Panicum virgatum (1)
Drosophila melanogaster (1)
Mus musculus (1)
Mycobacterium tuberculosis (1)
Mycobacterium tuberculosis H37Rv (1)
Saccharomyces cerevisiae x Saccharomyces uvarum (1)
Saccharomyces uvarum (1)

Organisms

Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (15)
pride (11)
MetaboLights (8)
EGA (5)
MassIVE (2)
dbGaP (1)
ENA (1)

Tissue

Cell culture (3)
Epithelial cell (2)
Whole body (2)
Blood platelet (1)
Blood serum (1)
Platelet (1)

Disease

Neuroblastoma (3)
Burn/trauma (1)
Essential thrombocythemia (1)
Neurofibromatosis 1 (1)
Polycythemia vera (1)
Tuberculosis (1)

Technology Type

Mass Spectrometry (11)
Mass spectrometry (7)
Bottom-up proteomics (6)
Data-dependent acquisition (5)
Data-independent acquisition (2)
Shotgun proteomics (2)
Illumina HiSeq 2000, Illumina HiSeq 2500, ILLUMINA (1)
Mass spectrometry assay (1)
Top-down proteomics (1)

Instrument Platform

MS Imaging - (2)
Scanning of was performed on an Axon 4000B scanner (1)
Orbitrap Eclipse (1)
Orbitrap Exploris 480 (1)
Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
MS Imaging - Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
MS Imaging - positive - direct infusion (1)
QExactive Plus (1)
Simulator (1)
Solarix (1)

Publication Date

2008 (5)
2025 (5)
2019 (4)
2024 (4)
2012 (3)
2014 (2)
2010 (2)
2021 (2)
2016 (2)
2026 (2)
2013 (1)
2007 (1)
2017 (1)
2023 (1)
2022 (1)

CHEBI ID

CHEBI:134424 (3)
CHEBI:16196 (3)
CHEBI:64433 (3)
CHEBI:72998 (3)
CHEBI:131145 (2)
CHEBI:132685 (2)
CHEBI:134028 (2)
CHEBI:134073 (2)
CHEBI:134074 (2)
CHEBI:134239 (2)
CHEBI:134241 (2)
CHEBI:134243 (2)
CHEBI:134270 (2)
CHEBI:134271 (2)
CHEBI:134287 (2)
CHEBI:134423 (2)
CHEBI:134426 (2)
CHEBI:134428 (2)
CHEBI:134448 (2)
CHEBI:134451 (2)
CHEBI:134454 (2)
CHEBI:134490 (2)
CHEBI:143713 (2)
CHEBI:15756 (2)
CHEBI:16027 (2)
CHEBI:16856 (2)
CHEBI:17351 (2)
CHEBI:27997 (2)
CHEBI:28610 (2)
CHEBI:28716 (2)

Metabolite Name

Clupanodonyl carnitine (2)
(13Z)-octadecenoic acid (1)
(6R)-5,10-methylenetetrahydrofolic acid (1)
(R)-1,2-distearoylphosphatidylethanolamine (1)
1,2-Di-O-myristoyl-3-O-(6-sulfoquinovopyranosyl)glycerol (1)
1,2-distearoyl-sn-glycero-3-phosphoserine (1)
1-(2,3-Dihydro-1H-pyrrolizin-5-yl)-2-propen-1-one (1)
1-Nitronaphthalene-5,6-oxide (1)
1-Nitronaphthalene-7,8-oxide (1)
1-O-oleoyl-sn-glycero-3-phosphocholine (1)
1-[(11Z)-octadecenoyl]-sn-glycero-3-phosphocholine (1)
1-[(1Z,9Z)-octadecadienyl]-sn-glycero-3-phosphocholine (1)
1-hexadecanoyl-sn-glycero-3-phosphocholine (1)
1-octadecanoyl-2-(4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoyl)-sn-glycero-3-phosphoserine (1)
1-oleoyl-2-stearoyl-sn-glycero-3-phospho-L-serine (1)
1-stearoyl-2-oleoyl-sn-glycero-3-phosphoserine (1)
13Z-Docosenoic Acid (1)
15Z-Tetracosenoic Acid (1)
2-hexadecanoyl-1-octadecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol) (1)
2-hexadecyl-sn-glycero-3-phosphocholine (1)
2-hydroxypropanoic acid (1)
23-Acetoxysoladulcidine (1)
3,4-Dihydro-4-[(5-methyl-2-furanyl)methylene]-2H-pyrrole (1)
3-(2-HYDROXYPHENYL)PROPANOATE (1)
3-[(5-Methyl-2-furanyl)methyl]-1H-pyrrole (1)
3-hydroxybutyric acid (1)
35-aminobacteriohopane-31,32,33,34-tetrol (1)
35-aminobacteriohopane-32,33,34-triol (1)
4-(21,22-dihydroxytritriacontyl)-2-methyl-2H-furan-5-one (1)
4-(trimethylammonio)butanoate (1)

First Public Date

2014 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (2)
Unknown experiment type (1)
One-color microarray (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)

Release Date

2022 (129)
2023 (121)
2021 (118)
2025 (104)
2024 (95)
2020 (76)
2019 (68)
2018 (67)
2016 (60)
2015 (59)
2017 (56)
2011 (37)
2013 (34)
2014 (31)
2012 (26)
2008 (21)
2010 (19)
2009 (16)
2026 (15)
2007 (14)
2006 (6)
2004 (4)
2005 (3)
2003 (1)

Lab affiliation

UAB CCC MS Proteomics Facility (2)
University of Wyoming (2)
1Dept. of Pharmacology and Toxicology, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, AR 72205 2Dept. of Environmental and Occupational Health, Fay W. Boozman College of Public Health, University of Arkansas for Medical Sciences, Little Rock, AR 72205 (1)
Associate Professor Stephen F. and Fay Evans Martin Endowed Professorship in Chemistry CPRIT Scholar Department of Chemistry University of Texas at Austin (1)
Department of Biology, University of Rochester (1)
Immunology and Microbial Pathogenesis Program, Graduate School of Medical Sciences, Weill Cornell Medicine, New York, NY, USA; Immunology Program, Sloan Kettering Institute, New York, NY, USA; Infectious Diseases Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (1)
ProteoToul, Institute of Pharmacology and Structural Biology (IPBS), CNRS, Toulouse (1)
School of Medicine, University College Dublin (1)
University of California-San Francisco (1)

Tags

xref:PubMed:15059259 (1)

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Ultra-Processed Food Intakes and Health Outcomes in Adults Older Than 60 Years: A Systematic Review.

Not available

S-EPMC12343033 | biostudies-literature

The Fay-Herriot model for multiply imputed data with an application to regional wealth estimation in Germany.

Not available

S-EPMC9542938 | biostudies-literature

A multimethod evaluation of bed provision and sleep education for young children and their families living in poverty.

Not available

S-EPMC10476044 | biostudies-literature

Gene expression change caused by CYS4 alleles

Each strain was grown overnight then diluted in fresh YPD to 10% v/v and grown for 3 hours at 30'C. Total RNA was isolated using an RNeasy mini kit, reverse transcribed, labeled with either Cy3 or Cy5, and hybridized to epoxy-coated slides with 6388, 70mer oligos (Qiagen-Operon). After an overnight ...

ORGANISM(S): Saccharomyces cerevisiae

2010-05-14 | E-GEOD-14102 | biostudies-arrayexpress

Estimating age conditional probability of developing disease from surveillance data.

Not available

S-EPMC517510 | biostudies-literature

Does the Degree Matter? MD and DO Students Who Match Into OB/GYN Report Different Experiences in US Undergraduate Medical Education

Not available

S-EPMC10449345 | biostudies-literature

Transcription profiling of C. elegans pocket protein ortholog, lin-35

LIN-35 is the single C. elegans ortholog of the mammalian pocket protein family members, pRb, p107, and p130. To gain insight into the roles of pocket proteins during development, a microarray analysis was performed with lin-35 mutants. Stage-specific regulation patterns were revealed, indicating th...

ORGANISM(S): Caenorhabditis elegans

2008-06-14 | E-GEOD-6547 | biostudies-arrayexpress

Construction of a modular analysis framework for blood Genomics Studies

We designed a strategy for microarray analysis that is based on the identification of transcriptional modules formed by genes coordinately expressed in multiple disease data sets. Mapping changes in gene expression at the module level generated disease-specific transcriptional fingerprints that prov...

ORGANISM(S): Homo sapiens

2008-08-11 | E-GEOD-11908 | biostudies-arrayexpress

Stimulation of unprimed macrophages with immune complexes triggers a low output of nitric oxide by calcium-dependent neuronal nitric-oxide synthase.

Not available

S-EPMC3281602 | biostudies-literature

Stabilizing proteins, simplified: A Rosetta-based webtool for predicting favorable mutations.

Not available

S-EPMC9490798 | biostudies-literature

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