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ProteomicsThe mechanism of infochemicals induced colony formation and flocculation in the microalga Scenedesmus subspicatus
Daphnia infochemicals can induce defensive responses in microalgae Scenedesmus spp., including colony formation and flocculation. We investigated the phenomenon using a combination of microalgal biology, physiological ecology, and quantitative isobaric tagging (iTRAQ) proteomics. We have discovered ...
ORGANISM(S): Desmodesmus subspicatus 
2020-05-06 | PXD014153 | Pride
Daphnia infochemicals Scenedesmus Induced defences Colony formation itraq proteomics Flocculation Predation 
TranscriptomicsTranscriptional profiling and ChIP-chip analyses of S. pombe strains exhibiting flocculation phenotype by overexpression and deletion
In the fission yeast Schizosaccharomyces pombe, the transcriptional-regulatory network that governs flocculation remains poorly understood. Here, we systematically screened an array of transcription factor deletion and overexpression strains for flocculation and performed microarray expression profi...
ORGANISM(S): Schizosaccharomyces pombe 
2012-11-02 | E-GEOD-41730 | biostudies-arrayexpress
ProteomicsMechanism behind microalgal self-flocculation
Self-flocculation driven by gravity has shown as promising microalgal harvesting technology due to no requirement for additives and energies. However, the inherent unclear mechanism impedes its efficiency enhancement and commercial application. Current researches most only focus on the protein and c...
ORGANISM(S): Chlorella Sp. 
2021-02-05 | PXD024007 |
TranscriptomicsPosttranscriptional Control of Flocculation, Surface Adhesion and Invasive Growth by the Pumilio gene pfr1+ in Schizosaccharomyces pombe
The regulation of flocculation, surface adhesion and invasive growth in the fission yeast Schizosaccharomyces pombe has focused primarily at the transcriptional level, but little is known with regards to posttranscriptional control. Here, we identified the Pumilio protein Pfr1 as a novel posttranscr...
ORGANISM(S): Schizosaccharomyces pombe 
2016-03-24 | E-GEOD-79537 | biostudies-arrayexpress
TranscriptomicsDetection of Human Viruses from wastewater sewage extracts
Sewage samples were collected and concentrated for Human and animal viruses. Viruses were cultured on Buffalo Green Monkey Cells (BGMK) and their genomic DNA/RNA were extracted and labeled with Cy3 and Cy5 respectively. Labeled DNA/RNA were hybridized unto the array and signals generated were analyz...
ORGANISM(S): Viruses 
2008-04-18 | E-GEOD-11195 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of Prz1 in fission yeast reveals a novel inhibitory role in flocculation and a conserved activating role in cell wall organization [expression]
Gene regulation in response to intracellular calcium is mediated by the calcineurin-activated transcription factor Prz1 in the fission yeast Schizosaccharomyces pombe. Genome-wide studies of the Crz1 and CrzA fungal orthologs have uncovered numerous target genes involved in conserved and species-spe...
ORGANISM(S): Schizosaccharomyces pombe 
2016-02-10 | E-GEOD-77759 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of Prz1 in fission yeast reveals a novel inhibitory role in flocculation and a conserved activating role in cell wall organization [ChIP-chip]
Gene regulation in response to intracellular calcium is mediated by the calcineurin-activated transcription factor Prz1 in the fission yeast Schizosaccharomyces pombe. Genome-wide studies of the Crz1 and CrzA fungal orthologs have uncovered numerous target genes involved in conserved and species-spe...
ORGANISM(S): Schizosaccharomyces pombe 
2016-02-10 | E-GEOD-77760 | biostudies-arrayexpress
TranscriptomicsMolecular mechanism of flocculation self-recognition in yeast and its role in mating and survival
Saccharomyces cerevisiae flocculation occurs when fermentable sugars are limiting and is therefore considered as a way to enhance the survival chance of Flo-expressing yeast cells. In this paper, the role of Flo1p in mating was demonstrated by showing that the mating efficiency, which contributes to...
ORGANISM(S): Saccharomyces cerevisiae 
2014-12-24 | E-GEOD-64468 | biostudies-arrayexpress
GenomicsSeparating the impact of flocculation upon global gene transcription in a yeast Cyc8 mutant
Separating the impact of flocculation upon global gene transcription in a yeast Cyc8 mutant
PRJNA1044767 | ENA
UnknownA novel chimaeric flocculation protein enhances flocculation in Saccharomyces cerevisiae.
Not available
S-EPMC5994806 | biostudies-literature
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