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TranscriptomicsChIP-chip by array of human cells for whole genome profiling of 4 histone modifications
Whole genome profiling of 4 histone modifications (H3K27me1, H3K27me3,H3K36me1 and H3K36me3) using ChIP-on-chip. It has recently been shown that nucleosome distribution, histone modifications and RNA polymerase II (Pol II) occupancy show preferential association with exons ("exon-intron marking"), l...
ORGANISM(S): Homo sapiens 
2010-12-03 | E-MTAB-336 | biostudies-arrayexpress
TranscriptomicsChIP-chip by array of human K562, U937 and CD14+ cells to identify histone modifcations in ENCODE regions
Chromatin immunoprecipitation microarray (ChIP-chip) study using 3 human cell lines (K562, U937, CD14+); of 19 histone modifications across 1% of the human genome used in the pilot phase of the ENCODE project.
paper abstract: It has recently been shown that nucleosome distribution, histone modifi...
ORGANISM(S): Homo sapiens 
2010-12-29 | E-MTAB-334 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of human cancer cell lines K562 and U937
Transcription profiling of two cancer cell lines: K562 and U937. It has recently been shown that nucleosome distribution, histone modifications and RNA polymerase II (Pol II) occupancy show preferential association with exons ("exon-intron marking"), linking chromatin structure and function to co- t...
ORGANISM(S): Homo sapiens 
2010-12-03 | E-MTAB-335 | biostudies-arrayexpress
GenomicsCardiogenics_24K - samples
Cambridge control samples using a 24k expression array from Illumina
EGAD00010000389 | EGA
GenomicsCardiogenics_660K - samples
Cambridge control samples using a 660K genotyping chip from Illumina
EGAD00010000391 | EGA
GenomicsCardiogenics_1.2M - samples
Cambridge control samples using a 1.2M genotyping chip from Illumina
EGAD00010000387 | EGA
GenomicsPowerful Identification of Cis-regulatory SNPs in Human Primary Monocytes Using Allele-Specific Gene Expression
The aim of this study was to compare the power to detect associations between SNPs using cis-eQTL mapping and ASE analysis (allele specific expression).
EGAS00000000119 | EGA
GenomicsASE vs GTE Study Data Access Committee
Data Access Committee EGAC01000000019
EGAC01000000019 | EGA
Genomicsena-DATASET-UCAM-GEL-15-04-2015-15:15:23:555-345 - samples
Whole exome sequencing BAM files for samples from the BRIDGE Consortium with pathogenic or likely pathogenic variants on genes linked to bleeding or platelet disorders.
EGAD00001001333 | EGA
GenomicsSequencing of heritable Bleeding and Platelet Disorders
The BRIDGE-BPD study aims to discover new causal genes for Bleeding and Platelet Disorders (BPD) by high throughput sequencing using cluster analyses based on improved and standardized deep phenotyping of cases. BPD is one of the 13 Rare Disease projects under the NIHR BioResource Rare Diseases BRID...
EGAS00001001172 | EGA
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