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UnknownMass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins.
Not available
S-EPMC7305180 | biostudies-literature
ProteomicsComprehensive atlas of the myelin basic protein interaction landscape
Intrinsically disorder myelin basic protein (MBP) is one of the key autoantigens in autoimmune neurodegeneration and multiple sclerosis particularly. MBP is highly positively charged and lacks distinct structure in solution and therefore its intracellular part-ners are still mostly enigmatic. Here w...
ORGANISM(S): Homo sapiens (Human) 
2022-02-16 | PXD028685 | Pride
Protein-protein interaction Liquid chromatography-tandem mass spectrometry Myelin basic protein Formaldehyde-induced cross-linking 
UnknownStructural characterization of formaldehyde-induced cross-links between amino acids and deoxynucleosides and their oligomers.
Not available
S-EPMC2866014 | biostudies-literature
UnknownEffects of Chemical Cross-Linking on the Structure of Proteins and Protein Assemblies.
Not available
S-EPMC12291049 | biostudies-literature
UnknownIdentification of Formaldehyde-Induced DNA-RNA Cross-Links in the A/J Mouse Lung Tumorigenesis Model.
Not available
S-EPMC10336729 | biostudies-literature
UnknownProbing H2O2-mediated Structural Dynamics of the Human 26S Proteasome Using Quantitative Cross-linking Mass Spectrometry (QXL-MS).
Not available
S-EPMC6495261 | biostudies-literature
GenomicsChIP-seq of Irx3 in primary cells from mouse gWAT and iWAT on days -1 and 1 of adipogenic differentiation
A map of global Irx3 binding sites during early stages of adipogenic differentiation. C57BL/gNJ (B6N) mice were fed a SDS maintenance chow diet, and at the age of 6-10 weeks, gWAT and iWAT was isolated and primary preadipocytes were isolated. For each depot, cells from 6-12 mice were pooled. Isolat...
ORGANISM(S): Mus musculus 
2025-05-16 | E-MTAB-13524 | biostudies-arrayexpress
ProteomicsHelpful dirt: Why diphtheria toxoid vaccines may also protect against non-toxigenic Corynebacterium diphtheriae strains
Diphtheria toxoid vaccines are among the oldest and safest vaccines known. The basic principle of production is the inactivation of purified diphtheria toxin by formaldehyde cross-linking, which converts the potentially fatal toxin in a completely harmless protein aggregate, which is still immunogen...
ORGANISM(S): Corynebacterium diphtheriae NCTC 13129 Clostridium tetani E88 
2019-04-17 | PXD009289 | Pride
Proteomics Corynebacterium ulcerans Mass spectrometry Corynebacteria Exoproteome Vaccination Secretome 
ProteomicsSynthetic Methylotrophic E. coli proteomics
To effectively use methanol derived from CO2 or methane in E. coli, it is crucial to develop a fast-growing strain that can efficiently process methanol. We successfully developed a methylotrophic E. coli strain, SM6, which has a doubling time of 3.5 hours, surpassing the growth rates of typical nat...
ORGANISM(S): Escherichia coli 
2024-04-24 | PXD051688 | Pride
Synthetic methylotroph Methanol Proteomics E. coli Synthetic biology 
ProteomicsProteomics of diphtheria toxoid vaccines reveals multiple proteins that are immunogenic and may contribute to protection of humans against Corynebacterium diphtheriae
Introduced for mass immunization in the 1920s, vaccines against diphtheria are among the oldest and safest vaccines known. The basic principle of their production is the inactivation of purified diphtheria toxin by formaldehyde cross-linking, which converts the potentially fatal toxin in a completel...
ORGANISM(S): Corynebacterium diphtheriae NCTC 13129 Clostridium tetani E88 
2019-04-18 | PXD012806 | Pride
Proteomics Mass spectrometry Coryebacteria Exoproteome Vaccination Secretome 
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