Fraser C M CM - OmicsDI

Show results for

Unknown (323)
Proteomics (17)
Genomics (14)
Transcriptomics (12)
Metabolomics (4)

Organisms

Homo sapiens (20)
Mus musculus (10)
Saccharomyces cerevisiae x Saccharomyces paradoxus (1)
Bacillus anthracis str. Ames (1)
Tursiops truncatus (1)
Spodoptera frugiperda (1)
Bacillus anthracis (1)
Apis mellifera (1)
Caenorhabditis elegans (1)
Danio rerio (1)
Bat coronavirus RaTG13 (1)
Drosophila melanogaster (1)
Escherichia coli (1)
Pseudomonas putida BIRD-1 (1)
Rattus norvegicus (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Synechocystis sp. (1)
soil metagenome (1)

Repository

pride (16)
EGA (13)
biostudies-arrayexpress (12)
MetaboLights (4)
MassIVE (1)
ENA (1)

Tissue

Cell culture (5)
Macrophage (2)
Blood (1)
Bone marrow (1)
Brain (1)
Breast (1)
Heart (1)
Kidney (1)
Lung (1)
Permanent cell line cell (1)

Disease

Disease free (2)
Breast cancer (1)
Coronavirus infectious disease (1)
Myocardial ischemia (1)
Pancreatic cancer (1)

Technology Type

Mass Spectrometry (16)
Shotgun proteomics (10)
Illumina 15K (8)
Mass spectrometry (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Bottom-up proteomics (3)
Data-dependent acquisition (2)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina NovaSeq X (1)
LTQ Orbitrap (Thermo Fisher Scientific) (1)
Liquid Chromatography MS - - - LTQ Orbitrap Velos (Thermo Scientific) (1)
Liquid Chromatography MS - alternating (1)

Publication Date

2022 (6)
2014 (5)
2023 (5)
2026 (3)
2010 (3)
2011 (2)
2025 (2)
2020 (2)
2013 (1)
2012 (1)
2008 (1)
2019 (1)
2016 (1)

CHEBI ID

CHEBI:27897 (3)
CHEBI:16217 (2)
CHEBI:16335 (2)
CHEBI:16704 (2)
CHEBI:17053 (2)
CHEBI:17368 (2)
CHEBI:17750 (2)
CHEBI:17964 (2)
CHEBI:18012 (2)
CHEBI:18183 (2)
CHEBI:28044 (2)
CHEBI:30314 (2)
CHEBI:30769 (2)
CHEBI:30831 (2)
CHEBI:30845 (2)
CHEBI:32816 (2)
CHEBI:33508 (2)
CHEBI:48131 (2)
CHEBI:6650 (2)
CHEBI:70976 (2)
CHEBI:10136 (1)
CHEBI:10724 (1)
CHEBI:108580 (1)
CHEBI:1113 (1)
CHEBI:116314 (1)
CHEBI:125601 (1)
CHEBI:131608 (1)
CHEBI:132244 (1)
CHEBI:132983 (1)
CHEBI:133086 (1)

Metabolite Name

(+)-7-epi-Syringaresinol 4'-glucoside (1)
(+/-)-1-Acetoxy-1-ethoxyethane (1)
(-)-11-Hydroxy-9,15,16-trioxooctadecanoic acid (1)
(-)-Maackiain (1)
(1R,2R,4S)-p-Menthane-1,2,8-triol (1)
(1S,2S,4R,8R)-p-Menthane-1,2,9-triol (1)
(2'E,4'Z,7'Z,8E)-Colnelenic acid (1)
(2'E,4'Z,8E)-Colneleic acid (1)
(2E)-Decenoyl-ACP (1)
(2E,6Z)-2,6-Nonadien-1-Yl acetate (1)
(3beta,5alpha,6beta,22E,24R)-23-Methylergosta-7,22-diene-3,5,6-triol (1)
(4E)-1,7-bis(4-hydroxyphenyl)hept-4-en-3-one (1)
(8E,15E)-1,8,15-Heptadecatriene-11,13-diyne (1)
(9R,10S,12Z)-9,10-Dihydroxy-8-oxo-12-octadecenoic acid (1)
(9S,10E,12Z,15Z)-9-Hydroxy-10,12,15-octadecatrienoic acid (1)
(?¡À)-Sulfobutanedioic acid (1)
(Cyclohexylmethyl)pyrazine (1)
(R)-Roemerine (1)
(Z)-3-(2,4,5-Trimethoxyphenyl)-2-propenal (1)
(alpha-D-mannosyl)7-beta-D-mannosyl-diacetylchitobiosyl-L-asparagine, isoform A (protein) (1)
1,2-Cyclohexanedione (1)
1,25-Dihydroxyvitamin D3-26,23-lactone (1)
1,3-Diisopropylbenzene (1)
1-(1-Pyrrolidinyl)-2-propanone (1)
1-(2,3-Dihydro-6,7-dimethyl-1H-pyrrolizin-5-yl)-2-hydroxy-1-propanone (1)
1-(2,4-dihydroxy-6-methoxyphenyl)-3-phenylprop-2-en-1-one (1)
1-(3-Aminopropyl)-4-aminobutanal (1)
1-(3-Methyl-2-butenoyl)-6-apiosylglucose (1)
1-(beta-D-Ribofuranosyl)-1,4-dihydronicotinamide (1)
1-Acetoxy-2-hydroxy-16-heptadecyn-4-one (1)

First Public Date

2014 (1)

Study type

Transcription profiling by array (7)
RNA-seq of coding RNA (3)
Unknown experiment type (2)

Release Date

2023 (36)
2021 (35)
2022 (34)
2020 (27)
2015 (25)
2024 (24)
2014 (22)
2025 (19)
2016 (13)
2011 (11)
2012 (10)
2018 (10)
2009 (10)
2013 (9)
2019 (8)
2017 (8)
2026 (6)
2010 (6)
2008 (6)
2007 (4)
2002 (3)
2005 (2)
2003 (2)
2006 (1)
2004 (1)
2001 (1)
2000 (1)
1999 (1)

Lab affiliation

School of Biosciences, University of Sheffield, Sheffield, UK (2)
Charles Perkins Centre, University of Sydney (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) San Francisco, CA 94158 USA (1)
Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada (1)
Functional Cellular Networks Section Laboratory of Immune System Biology National Institute of Allergy and Infectious Diseases National Institutes of Health (1)
Functional Cellular Networks Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892-1892, USA (1)
Gene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA (1)
Helmholtz Zentrum München, Institute of Lung Biology and Disease, Member of the German Center for Lung Research (DZL), Munich, Germany (1)
IRIC-Université de Montréal (1)
King's College London, Dept. of Basic and Clinical Neuroscience, Maurice Wohl Clinical Neuroscience Institute, 5 Cutcombe Road, London, SE5 9NU (1)
Molecular Structure of Cell Signalling Laboratory, The Francis Crick Institute, United Kingdom (1)
Quantitative Biosciences Institute (QBI), University of California, San Francisco, San Francisco, CA USA J. David Gladstone Institutes, San Francisco, San Francisco, CA, USA Department of Bionengineer and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA (1)
SynthSys University of Edinburgh (1)
UCSF (1)
University of Illinois at Chicago (1)

Tags

xref:PubMed:21467159 (1)

Previous page
1 / 37
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 37
Next page

Sort by:

Relevance

Page size

Genome-wide analysis of alternative splicing in Caenorhabditis elegans

Alternative splicing (AS) plays a crucial role in the diversification of gene function and regulation. Consequently, the systematic identification and characterization of temporally regulated splice variants is of critical importance to understanding animal development. We have used high-throughput ...

ORGANISM(S): Caenorhabditis elegans

2010-12-14 | E-GEOD-25927 | biostudies-arrayexpress

Quantitative chemoproteomic identification of lysine carboxylation in proteins

Carbon dioxide is an abundant biological gas that drives adaptive physiological responses within organisms from all domains. The basic biochemical mechanisms by which proteins serve as sensors of CO2 are, therefore, of great interest. CO2 is a potent electrophilic, and thus one way it can modulate p...

ORGANISM(S): Escherichia coli Synechocystis sp.

2023-09-09 | PXD031976 | Pride

Annotated draft genome sequences of three species of Cryptosporidium: Cryptosporidium meleagridis isolate UKMEL1, C. baileyi isolate TAMU-09Q1 and C. hominis isolates TU502_2012 and UKH1.

Not available

S-EPMC5407061 | biostudies-literature

Direct heterobenzylic fluorination, difluorination and trifluoromethylthiolation with dibenzenesulfonamide derivatives.

Not available

S-EPMC6050628 | biostudies-literature

Metabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants

Application of mass spectrometry enables the detection of metabolic differences between groups of related organisms. Differences in the metabolic fingerprints of wild-type Solanum lycopersicum and three monogenic mutants, ripening inhibitor (rin), non-ripening (nor) and Colourless non-ripening (Cnr)...

2014-02-07 | MTBLS36 | MetaboLights

An atlas of the aging lung mapped by single cell transcriptomics and deep tissue proteomics

Aging promotes lung function decline and susceptibility to chronic lung diseases, which are the third leading cause of death worldwide. We used single cell transcriptomics and mass spectrometry to quantify changes in cellular activity states of 30 cell types and the tissue proteome from lungs of you...

ORGANISM(S): Mus musculus (Mouse)

2019-01-21 | PXD012307 | Pride

Lung Lipid metabolism Single cell transcriptomics Total proteome Qdsp Chronic lung disease Aging Lung cell atlas Extracellular matrix

Variation in stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope compositions along antlers of Qamanirjuaq caribou (Rangifer tarandus groenlandicus).

Not available

S-EPMC10945312 | biostudies-literature

Associations of gestational weight gain with maternal body mass index, waist circumference, and blood pressure measured 16 y after pregnancy: the Avon Longitudinal Study of Parents and Children (ALSPAC).

Not available

S-EPMC3095501 | biostudies-literature

Bacillus cereus strain 31673

Comparative Genomic Hybridization. Analysis of genomic content of closely related Bacillus species. Refer to individual records for strain information. Refer to platform and individual sample records for experimental protocols.

ORGANISM(S): Bacillus anthracis str. Ames

2010-06-05 | E-GEOD-568 | biostudies-arrayexpress

Insect larvae fed on resistant Zea mays (corn) expressing maize insect resistant 1 cysteine protease (Mir1-CP) compensate for Mir1-CP degradation of their peritrophic membrane by altering expression of midgut transcripts as revealed through mRNA-seq

Native host plant insect resistance in the maize inbred line Mp708 was developed by traditional plant breeding. Resistant Mp708 thwarts feeding by fall armyworm (Spodoptera frugiperda [J.E. Smith]; Lepidoptera: Noctuidae), numerous other lepidopteran pests, and the coleopteran western corn rootworm...

ORGANISM(S): Spodoptera frugiperda

2012-12-01 | E-GEOD-42659 | biostudies-arrayexpress

Previous page
1 / 37
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 37
Next page

Sort by:

Relevance

Page size

370 Results

Show results for

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets