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MetabolomicsFruit setting rewires central metabolism via gibberellin cascades
Fruit set is the process whereby ovaries develop into fruits after pollination and fertilization. The process is induced by the phytohormone gibberellin (GA) in tomatoes, as determined by the constitutive GA response mutant procera However, the role of GA on the metabolic behavior in fruit-setting o...
2020-09-11 | MTBLS1892 | MetaboLights
MetabolomicsHealth outcomes of fruit juice and fruity beverage: a comparative analysis of gut microbiota and metabolomics in rats (Metabolomics assay)

BACKGROUND: Evidence on the relationship between food processing and health outcomes has been increasing steadily. Under this context, ultra-processing food, such as sugar-sweetened fruity beverages (SS-FB), is associated with a higher risk of metabolic syndrome. However, whether...

2022-08-24 | MTBLS3943 | MetaboLights
ProteomicsProteomics analysis during fruit development of apple
Here, we conducted an tandem mass tag (TMT)-based proteomics analysis of apple fruit development over five growth stages. Our objective was to gain a global overview of the dynamics of apple fruit development and identify key regulatory networks and proteins that contribute to fruit development and ...
ORGANISM(S): Malus domestica 
2016-10-13 | PXD004568 | Pride
Apple Malus Tandem mass tag Fruit development 
ProteomicsTomato phototropin1 fruit proteome
Tomato phototropin1 mutant exhibits deep red color in the ripe fruits compared to the wild type. However, the mechanisms governing this intense fruit coloration in the mutant are largely unknown. Therefore, a proteomic approach combined with carotenoid profiling and carotenogenic gene expression was...
ORGANISM(S): Solanum lycopersicum 
2021-02-24 | PXD018150 | Pride
Mature green Breaker and red ripe stages of ripening Chlorophyll degradation Tomato fruit proteome Carotenoids 
ProteomicsTomato clade proteome - Green-fruited Solanum habrochaites lacks fruit-specific carotenogenesis due to metabolic and structural blocks
Members of the tomato clade exhibit wide diversity in fruit coloration, growth habit, leaf morphology and mating preferences. However, the mechanisms governing inter-species diversity in fruit coloration are largely unknown. Therefore, a proteomic approach combined with carotenoid profiling and caro...
ORGANISM(S): Solanum lycopersicum 
2017-10-09 | PXD003817 | Pride
Red/orange and green fruited species Fruit proteome Tomato clade Chlorophyll degradation Chromoplast formation 
ProteomicsPunica granatum L. Peel LC-MS/MS
We combined an iTRAQ-based proteome-level analysis with an RNA sequencing-based transcriptome-level analysis to detect the proteins and genes related to fruit peel colour development during two fruit development stages in the ‘Tunisia’ and ‘White’ pomegranate cultivars.
ORGANISM(S): Punica granatum 
2018-10-19 | PXD009129 | Pride
Pomegranate Peel Peel 
ProteomicsCapsicum fruit development - Integrative transcriptome and proteome analysis identifies major metabolic pathways involved in pepper fruit development
Pepper(Capsicum annuum L.) fruit development is a complex and genetically programmed process, a comparative study of transcriptome and proteome changes during two varieties of pepper development（IMG, MG, Br and MR） has been carried out by using RNA-Seq and Lable-free quantitation technology.
ORGANISM(S): Capsicum annuum 
2019-01-21 | PXD010746 | Pride
Pepper  fruit development  transcriptome  proteome  cell wall  capsanthin  ascorbate  tocopherol 
ProteomicsAn Integrated Transcriptome and Proteome Analysis Reveals New Insights of Fruit Russeting Formation in ‘Golden Delicious’ Apple
Russeting of apple fruit is a non-invasive physiological disorder. It occurs mainly in 'Golden Delicious' apple and its hybrids, while understanding of its molecular mechanism is still limited. In this study, we used mRNA sequencing and an isobaric tag for relative and absolute quantitation-based qu...
ORGANISM(S): Rosaceae 
2019-09-26 | PXD014960 | Pride
Fruit russeting formation  transcriptome  proteome  ‘golden delicious’ apple  lignin biosynthesis 
ProteomicsComparative proteomic analysis provides novel insights into the regulation mechanism underlying the fruit ripening process in papaya (Carica papaya L.)
Papaya (Carica papaya L.) is a typical climacteric fruit, undergoing massive physico-chemical changes during ripening. Although papaya is widely cultivated and consumed, few studies have characterized the variations in metabolism during its ripening process at the proteasome level. Using an integrat...
ORGANISM(S): Carica papaya 
2019-11-12 | PXD008871 | Pride
Metabolism Fatty acid Ripening Papaya Differential expressed protein 
ProteomicsPlastoglobules are a biosynthetic platform contributing to carotenoid accumulation during tomato fruit maturation
Chloroplasts and chromoplasts of tomato fruits contain lipid droplets known as plastoglobules (PG). Recent studies have shown that PG act as a metabolic sink to store triacylglycerol (TAG), carotenoids, vitamin E, and K as well as other lipophile compounds. In addition, it has been shown that protei...
ORGANISM(S): Solanum lycopersicum 
2023-03-11 | PXD035763 | Pride
Lc-msms Carotenoid Plastoglobules Proteome Chromoplasts Tomato 
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