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ProteomicsIntegrated omics approaches to explore a new system of genetic control of dibenzothiophene desulfurization in Gordonia alkanivorans strain 135 -- MS1
This project aims to explore a new system for genetic control of dibenzothiophene desulfurization in Gordonia alkanivorans strain 135 using integrated omics approaches. A quantitative protomics, RNA-Seq analysis was performed. RNA-seq results were further validated using qRT-PCR for differentially e...
ORGANISM(S): Gordonia alkanivorans 
2025-05-07 | PXD058641 | Pride
Dibenzothiophene Ms1-only G. alkanivorans 135 Directms1 
UnknownCharacterization and genomic analysis of Gordonia alkanivorans 135, a promising dibenzothiophene-degrading strain.
Not available
S-EPMC7823215 | biostudies-literature
ProteomicsQuantitative assessment of microbiomes using ultra-fast MS/MS-free metaproteomics: model 2
This study presents an adaptation of the novel ultrafast MS1-based method called DirectMS1 to characterization of the single microorganisms and microbiomes. Using DirectMS1 we demonstrate the blind identification (with no prior knowledge of the bacterias in the sample) of a single bacterial species...
ORGANISM(S): Gordonia polyisoprenivorans Rhodococcus qingshengii Gordonia alkanivorans Rhodococcus opacus Rhodococcus erythropolis 
2026-08-07 | PXD050887 | Pride
Metaproteomics Ms1-only Microbiomes Directms1 
ProteomicsQuantitative assessment of microbiomes using ultra-fast MS/MS-free metaproteomics: model 1 and 3
This study presents an adaptation of the novel ultrafast MS1-based method called DirectMS1 to characterization of the single microorganisms and microbiomes. Using DirectMS1 we demonstrate the blind identification (with no prior knowledge of the bacterias in the sample) of a single bacterial species...
ORGANISM(S): Gordonia amicalis Gordonia alkanivorans Rhodococcus opacus Rhodococcus erythropolis Priestia aryabhattai 
2026-08-07 | PXD050587 | Pride
Metaproteomics Ms1-only Microbiomes Directms1 
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