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TranscriptomicsRNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings
Comparison analysis of Arabidopsis Col-0 wild-type and fbl17 mutant transcriptomes to study the implication of FBL17 in cell cycle regulation and DNA damage responses
ORGANISM(S): Arabidopsis thaliana 
2020-12-31 | E-MTAB-9050 | biostudies-arrayexpress
ProteomicsRBR1-E2F/DP transcriptional regulation modulated by the F-box protein FBL17
In all eukaryotes, F-box proteins of SCF E3 ligase complexes have been well-documented to control the abundance of numerous critical regulatory proteins. In Arabidopsis, one of them, F-BOX-LIKE17 (FBL17), stands out for playing a key role in DNA replication, DNA damage and more recently for the cont...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-02-23 | PXD063507 | Pride
Cell cycle E2f/rbr Ubiquitin Plant F-box 
ProteomicsArabidopsis AGO1 N-terminal Poly-Q domain promotes phase separation and association with stress granules during heat stress
In Arabidopsis thaliana, ARGONAUTE1 (AGO1) plays a central role in microRNA (miRNA) and small interfering RNA (siRNA)-mediated silencing. Nuclear AGO1 is loaded with miRNAs and exported to the cytosol where it associates to the rough ER to conduct miRNA-mediated translational repression, mRNA cleava...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2024-06-22 | PXD048594 | Pride
Stress granule Arabidopsis Ago1 Rna silencing Heat stress Phase separation 
Transcriptomicsdella-regulation in darkness versus light-DELLAs contribute to skotomorphogenesis
rs09-09_della-dark - della-regulation in darkness versus light - Identification of DELLA-dependent downstream targets in darkness - Aim was to determine downstream target of DELLA proteins involved in skotomorphogenesis. Wt, ga1-3, ga1-3_rga_gai_rgl1_rgl2_rgl3 global seeds were sterilized, sown on M...
ORGANISM(S): Arabidopsis thaliana 
2011-06-12 | E-GEOD-22681 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis Cul3a-1 mutant and control plants during germination in far red light
Parallel germination of Cul3a-1 mutant and control plants in far red light.
ORGANISM(S): Arabidopsis thaliana 
2005-01-01 | E-MEXP-175 | biostudies-arrayexpress
TranscriptomicsOverexpression of NtmybA2 in tobacco BY-2 cells
Promoters of many G2/M phase-specific genes in plants contain mitosis-specific activator (MSA) elements, which act as G2/M phase-specific enhancers and bind with R1R2R3-Myb transcription factors. A least three R1R2R3-Myb proteins are expressed in tobacco (Nicotiana tabacum). To examine the genome-wi...
ORGANISM(S): Nicotiana tabacum 
2010-05-22 | E-GEOD-14251 | biostudies-arrayexpress
TranscriptomicsCell cycle-regulated gene expression in tobacco cells
Tobacco BY-2 cells can be highly synchronized by treatment with an inhibitor of DNA synthesis, aphidicolin. For comprehensive understanding of cell cycle-regulated gene expression in tobacco, microarray analysis was conducted in synchronized cultures of BY-2 cells. Cells were treated with aphidicoli...
ORGANISM(S): Nicotiana tabacum 
2010-05-22 | E-GEOD-14250 | biostudies-arrayexpress
TranscriptomicsRole of HB6 in plant development
rs09-07_hb6 - hb6 - The aim is to determine downstream target of HB6 transcription factor involved in plant development - Transcriptome on Arabidopsis HB6 over-expressing plants and BPM Knock down plants during development Keywords: wt vs mutant comparison 6 dye-swap - CATMA arrays
ORGANISM(S): Arabidopsis thaliana 
2010-08-01 | E-GEOD-19095 | biostudies-arrayexpress
Transcriptomicsresponse of ein3eil1 mutants to fe deficiency-Role of ethylene in Fe deficieny response signalling
au10-14_fer - response of ein3eil1 mutants to fe deficiency - Response of ein3eil1 mutants to Fe deficiency - Wild type seedlings and ethylene insensitive ein3eil1 seedlings were germinated and grown in the presence of 50 µM Fe or absence of Fe (0 µM) on Hoagland medium agar plates until the age of ...
ORGANISM(S): Arabidopsis thaliana 
2011-12-31 | E-GEOD-26510 | biostudies-arrayexpress
Transcriptomicsdella-regulation of salt stress responses-DELLAs contribute to salt stress responses
rs06-07_della - della-regulation of salt stress responses - Identification of DELLA-dependent dowtream targets in response to salt stress - Aim was to determine downstream target of DELLA proteins involved in salt stress tolerance. Wt, ga1-3, penta seeds were sterilized, sown on MS agar plates then ...
ORGANISM(S): Arabidopsis thaliana 
2010-05-25 | E-GEOD-8556 | biostudies-arrayexpress
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