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UnknownGenerative modeling of single-cell time series with PRESCIENT enables prediction of cell trajectories with interventions.
Not available
S-EPMC8163769 | biostudies-literature
UnknownQuantification of Uncertainty in Peptide-MHC Binding Prediction Improves High-Affinity Peptide Selection for Therapeutic Design.
Not available
S-EPMC6715517 | biostudies-literature
UnknownComputationally Optimized SARS-CoV-2 MHC Class I and II Vaccine Formulations Predicted to Target Human Haplotype Distributions.
Not available
S-EPMC7384425 | biostudies-literature
TranscriptomicsAnalysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarray
The fraction of dissolved dimethylsulfoniopropionate (DMSPd) converted by marine bacterioplankton into the climate-active gas dimethylsulfide (DMS) varies widely in the ocean, with the factors that determine this value still largely unknown. One current hypothesis is that the ratio of DMS formation:...
ORGANISM(S): marine metagenome 
2010-08-05 | E-GEOD-21325 | biostudies-arrayexpress
ProteomicsA-to-I mRNA editing enables bacteria to produce two protein versions from a single gene and affects bacterial growth
Adenosine-to-inosine (A-to-I) mRNA editing can affect the sequence and function of translated proteins because the ribosome reads inosine (I) as guanosine (G). Previously, we discovered that A-to-I mRNA editing occurs in Escherichia coli. However, the prevalence of A-to-I mRNA editing across bacteri...
ORGANISM(S): Acinetobacter baylyi 
2025-07-21 | PXD051887 | Pride
Adenosine-to-inosine (a-to-i) mrna editing  gammaproteobacteria 
GenomicsA Cdx4-Sall4 regulatory module controls the transition from mesoderm formation to embryonic hematopoiesis
Deletion of caudal/cdx genes alters hox gene expression and causes defects in posterior tissues and hematopoiesis. Yet, the defects in hox gene expression only partially explain these phenotypes. To gain deeper insight into Cdx4 function, we performed ChIP-seq combined with gene expression profiling...
ORGANISM(S): Danio rerio 
2013-12-02 | E-GEOD-48254 | biostudies-arrayexpress
UnknownExperiencing a Severe Weather Event Increases Concern About Climate Change.
Not available
S-EPMC6378300 | biostudies-literature
UnknownSeparation of platelets by size in a microfluidic device based on controlled incremental filtration.
Not available
S-EPMC12400926 | biostudies-literature
UnknownDeepLigand: accurate prediction of MHC class I ligands using peptide embedding.
Not available
S-EPMC6612839 | biostudies-literature
GenomicsLigand-dependent dynamics of retinoic acid receptor binding during early neurogenesis
Among its many roles in development, retinoic acid determines the anterior-posterior identity of differentiating motor neurons by activating Retinoic Acid Receptor (RAR)-mediated transcription. RAR is thought to bind the genome constitutively, and only induce transcription in the presence of the ret...
ORGANISM(S): Mus musculus 
2010-12-10 | E-GEOD-19409 | biostudies-arrayexpress
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