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MetabolomicsPlasma metabolome alteration in dairy cows with left displaced abomasum before and after surgical correction
Left displaced abomasum (LDA) leads to substantial changes in the metabolism of dairy cows. Surgical correction of LDA can rapidly improve the health of cows; however, changes in metabolism following surgery are rarely described. To investigate the changes of plasma metabolome in cows with LDA befor...
2022-08-17 | MTBLS4126 | MetaboLights
ProteomicsThe Human Melanoma Proteome Atlas – Defining the Molecular Pathology & Complementing the Melanoma Transcriptome
This project is an initiative to map the protein levels in malignant melanoma tumor samples, focused on in-depth histopathology coupled to proteome characterization. The protein levels and localization from this project were determined for a broad spectrum of diverse, surgically isolated melanoma tu...
ORGANISM(S): Homo sapiens (Human) 
2021-07-16 | PXD026086 | Pride
Proteogenomics Histopathology Heterogeneity Braf Phosphorylation Driver mutations Metastatic malignant melanoma Sub-cellular localization Acetylation stoichiometry Post-translational-modification 
ProteomicsProteomic Analysis on Paraffine-Archived Melanoma
The discovery of novel protein biomarkers in melanoma is crucial. Our introduction of formalin-fixed paraffin embedded (FFPE) tumor protocol provides new opportunities to understand the progression of melanoma and open the possibility to screen tens of thousands of FFPE samples deposited in tumor bi...
ORGANISM(S): Homo sapiens (Human) 
2022-02-17 | PXD028930 | Pride
Prognostic and predictive biomarkers Proteomics Metastatic melanoma Immunotherapy targeted therapy responder Outcome and survival by protein expression 
TranscriptomicsTranscription profiling of rat mixed-tissue RNA samples using different labeling protocols
At one site (#10), three different batches of MTRRM (see E-TABM-16), were labeled with two different kits (Enzo and Affymetrix) and hybridized to two different Affymetrix Arrays (RAE230A and RAE230_2).
ORGANISM(S): Rattus norvegicus 
2008-04-16 | E-MEXP-1563 | biostudies-arrayexpress
UnknownProtein Expression in Metastatic Melanoma and the Link to Disease Presentation in a Range of Tumor Phenotypes.
Not available
S-EPMC7140007 | biostudies-literature
ProteomicsProteogenomic of postmortem melanoma metastases from preimmuno
Proteomic analysis of postmortem melanoma metastases from pre-immunonotherapy era
ORGANISM(S): Homo sapiens (Human) 
2025-06-16 | PXD058546 | Pride
Human 
TranscriptomicsTranscription profiling of rat mixed-tissue RNA samples over 8.5 months to monitor processing drift
Process drift at one site was monitored by assaying the rat Mixed Tissue RNA Reference Material (see E-TABM-16) multiple times a week for 8.5 months.
ORGANISM(S): Rattus norvegicus 
2008-04-16 | E-MEXP-1565 | biostudies-arrayexpress
ProteomicsProteogenomics linked to histopathology identifies subtypes and progression biomarkers in malignant melanoma
In this study, proteogenomic analysis coupled with clinical histopathology revealed proteomic subtypes and identified candidate markers, which uncovered tumor biology related to patient survival. A total of 12,695 proteins and 45,356 phosphosites were quantified. This newly generated proteomic data ...
ORGANISM(S): Homo sapiens (Human) 
2025-05-06 | PXD035206 | Pride
Cancer Proteomics Mass spectrometry Melanoma Proteogenomics Metastasis 
TranscriptomicsTranscription profiling of mouse Ostes mutant soleus muscle vs wild type soleus muscles
A comparison of Ostes homozygous mutant soleus muscles to wildtype soleus muscles. Hybridisation of 3 Mouse CNG 25k oligo arrays, using 3 pools of 10 mice(5 male and 5 female) for mutant and WT.

ORGANISM(S): Mus musculus 
2009-09-17 | E-MEXP-1873 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse Ostesy mutant soleus muscles vs wild type soleus muscles.
A comparison of Ostesy mutant soleus muscles to wildtype soleus muscles. Hybridisation of 3 Mouse SGC 7.5k oligo arrays, using 3 pools of 10 mice(5 male and 5 female) for mutant and WT.
ORGANISM(S): Mus musculus 
2007-12-10 | E-MEXP-482 | biostudies-arrayexpress
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