Glycan-binding protein

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Unknown (1212)
Proteomics (143)
Transcriptomics (113)
Genomics (31)
Metabolomics (9)

Organisms

Homo sapiens (43)
Mus musculus (37)
Caldicellulosiruptor saccharolyticus (4)
Streptococcus pneumoniae (4)
Bacteroides thetaiotaomicron (3)
Bifidobacterium longum (2)
Lepeophtheirus salmonis (2)
Solanum tuberosum (2)
Escherichia coli (2)
Saccharomyces cerevisiae (2)
Bacteroides xylanisolvens (1)
Agrobacterium tumefaciens (1)
Streptococcus dysgalactiae subsp. equisimilis (1)
Bacteroides cellulosilyticus (1)
Dorea longicatena DSM 13814 (1)
Bacillus sp. N16-5 (1)
Neurospora crassa OR74A (1)
Thermotoga maritima MSB8 (1)
Musa sp. (1)
Lactococcus lactis (1)
Bifidobacterium breve UCC2003 (1)
Streptococcus mutans (1)
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Seminavis robusta (1)
Brassica napus (1)
Actinobacillus pleuropneumoniae (1)
Bacillus cereus (1)
Porphyromonas gingivalis (1)
Zea mays (1)
Vitis vinifera (1)

Organisms

Homo sapiens (9)
Mus musculus (6)
Campylobacter jejuni subsp. jejuni (1)
Bacteroides thetaiotaomicron (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (102)
pride (91)
MassIVE (30)
ENA (29)
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geo (12)
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Tissue

Cell culture (24)
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Plant cell (1)
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Podocyte (1)
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T cell (1)

Disease

Disease free (4)
Acute leukemia (3)
Acute gastroenteritis (2)
COVID-19 (2)
Multiple myeloma (1)
Burkitt lymphoma (1)
Chronic lymphocytic leukemia (1)
Colon cancer (1)
Coronavirus infectious disease (1)
Dengue disease (1)
Head and neck squamous cell carcinoma (1)
Hepatocellular carcinoma (1)
Human immunodeficiency virus infectious disease (1)
Influenza (1)
Lung adenocarcinoma (1)
Lymphoma (1)
Oral squamous cell carcinoma (1)
Ovarian cancer (1)
Septic shock (1)
Tongue squamous cell carcinoma (1)

Technology Type

Mass Spectrometry (91)
Shotgun proteomics (40)
Bottom-up proteomics (20)
Affinity purification coupled with mass spectrometry proteomics (16)
Data-dependent acquisition (7)
Top-down proteomics (7)
Mass spectrometry (6)
Gel-based experiment (6)
Mass spectrometry assay (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Glycoproteomics (2)
MSE (2)
SRM/MRM (2)
Data-independent acquisition (1)
HDMSE (1)
Metaproteomics (1)

Instrument Platform

Orbitrap Eclipse (7)
Q Exactive (5)
Orbitrap Fusion Lumos (4)
Liquid Chromatography MS - positive - reverse-phase (4)
Liquid Chromatography MS - negative - reverse-phase (4)
6550 iFunnel Q-TOF LC/MS (3)
LTQ Orbitrap Elite (2)
LTQ Orbitrap Velos (2)
Orbitrap Exploris 480 (2)
Orbitrap Fusion (2)
Q Exactive Plus (2)
SolariX (2)
TimsTOF Pro (2)
TripleTOF 5600 (2)
Liquid Chromatography MS - positive - reverse phase (2)
IPK PhenoSphere (1)
Linux (1)
TruSeq stranded Total RNA kit (Illumina) (1)
The RNeasy mini kit (Qiagen) (1)
Illumina MiSeq (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap XL (1)
Orbitrap Astral (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
TripleTOF 6600 (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - HILIC (1)

Publication Date

2011 (32)
2022 (26)
2025 (24)
2024 (22)
2021 (21)
2026 (19)
2010 (15)
2020 (14)
2023 (13)
2013 (12)
2015 (11)
2019 (10)
2012 (9)
2016 (8)
2017 (6)
2014 (5)
2009 (5)
2008 (4)
2018 (3)
2007 (1)
2006 (1)

CHEBI ID

CHEBI:189730 (1)
CHEBI:80220 (1)
CHEBI:42717 (1)
CHEBI:166610 (1)
CHEBI:86032 (1)
CHEBI:48294 (1)
CHEBI:89639 (1)
CHEBI:16039 (1)
CHEBI:15350 (1)
CHEBI:113528 (1)
CHEBI:26271 (1)
CHEBI:28230 (1)
CHEBI:30772 (1)
CHEBI:89573 (1)
CHEBI:132223 (1)
CHEBI:18012 (1)
CHEBI:30915 (1)
CHEBI:15940 (1)

Metabolite Name

Piscidic Acid (3)
Imidazolone A (3)
Peimine (3)
Estrane (3)
Phosphate (3)
Kynurenic Acid (3)
Oleamide (3)
Adenosine (3)
Guanine (3)
L-Tryptophan (3)
Sebacic Acid (3)
Bax Inhibitor Peptide V5 (2)
Urea Citrate (2)
2-(Ethoxymethyl)Phenol (2)
3-Furoic Acid (2)
Columbin (2)
N6-Galacturonyl-L-lysine (2)
Piperonylic Acid (2)
Dioctyl Phthalate (2)
2,4,14-Eicosatrienoic acid isobutylamide (2)
Ile Ile (2)
N-Acetylaspartic Acid (2)
Soyasaponin II (2)
1-(3-Carboxypropylcarbamoyl)-5-fluorouracil (2)
Quisqualic acid (2)
Heptadecasphinganine (2)
Phyllanthusol B (2)
Cordycepin (2)
Hydroxyprolyl-Tryptophan (2)
Methionyl-Proline (2)

First Public Date

2017 (7)
2014 (4)
2026 (3)
2024 (3)
2023 (3)
2021 (3)
2025 (2)
2020 (2)
2022 (1)
2015 (1)

Classification

bacteria (2)

Modification

-18.010565 (1)
0.984016 (1)
15.994915 (1)
42.010565 (1)

Study type

Transcription profiling by array (80)
RNA-seq of coding RNA (11)
Unknown experiment type (5)
Human - One-color microarray (1)
Transcription profiling by RT-PCR (1)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2021 (121)
2022 (115)
2020 (96)
2023 (94)
2024 (86)
2018 (83)
2025 (81)
2017 (74)
2019 (67)
2015 (65)
2016 (61)
2014 (61)
2011 (57)
2010 (57)
2013 (56)
2012 (48)
2009 (32)
2008 (26)
2007 (10)
2026 (9)
2006 (5)
2004 (4)
2005 (3)
2001 (2)
1999 (1)

Lab affiliation

Department of Chemistry, Stanford ChEM-H (2)
The University of Melbourne (2)
Utrecht University (2)
1. School of Natural Sciences, Macquarie University, Sydney, NSW 2109, Australia 2. Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, Japan (1)
1. School of Natural Sciences, Macquarie University, Sydney, New South Wales, Australia 2. Institute for Glyco-core Research (iGCORE), Nagoya University, Nagoya, Japan (1)
1Department of Chemistry and Sarafan Chem-H, Stanford University, Stanford, CA 94305, USA 2Howard Hughes Medical Institute, Stanford, CA 94305, USA (1)
1Department of Chemistry, Georgia State University, Atlanta, GA (1)
Academia Sinica, Institute of Biological Chemistry (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Assistant Professor Department of Cellular and Molecular Medicine Florida International University | Herbert Wertheim College of Medicine (1)
Assistant Professor, Department of Biochemistry, University of Washington, Seattle, Washington 98195, USA (1)
Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA (1)
Bioanalytical Mass Spectrometry Group, Max Planck Institute for Multidisciplinary Sciences, 37077 Göttingen, Germany (1)
Biochemistry (1)
Biochemistry Department, Kavli Institute for Nanoscience Discovery, University of Oxford, UK (1)
Biomolecular Mass Spectrometry & Proteomics, Bijvoet Center for Biomolecular Research, Department of Chemistry, Faculty of Science, Utrecht University, Utrecht, the Netherlands. (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Science, University of Utrecht, Padualaan 8, Utrecht, 3584 CH, The Netherlands (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, The Netherlands Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, The Netherlands (1)
Biomolecular Mass Spectrometry and Proteomics, Department of Chemistry, Utrecht University (1)
Biomolecular characterization unit, Center for Sustainable Resource Science, RIKEN (1)
Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom (1)
CNRS-IPHC-LSMBO (1)
Center for Biomedical Mass Spectrometry Boston University School of Medicine 670 Albany St, Rm 511 Boston, MA 02118-2646 USA (1)
Center for Proteomics and Metabolomics Leiden University Medical Center Tel +31-71-5266394 P.J.Hensbergen@lumc.nl https://www.lumc.nl/org/proteomics-metabolomics/ https://cpm.lumc.nl (1)
Center for Proteomics and Metabolomics, LUMC, The Netherlands (1)
Center for Proteomics and Metabolomics, Leiden University Medical Center (1)
Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands (1)
Centre for Biologics Evaluation, Biologics and Genetic Therapies Directorate, Health Canada, Canada (1)
Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA (1)
Copenhagen Center for Glycomics (CCG) Department of Cellular and Molecular Medicine University of Copenhagen (1)

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Cell-based glycan arrays for probing glycan-glycan binding protein interactions.

Not available

S-EPMC5830402 | biostudies-literature

Membrane environment can enhance the interaction of glycan binding protein to cell surface glycan receptors.

Not available

S-EPMC4136721 | biostudies-literature

Printed covalent glycan array for ligand profiling of diverse glycan binding proteins.

Not available

S-EPMC534418 | biostudies-literature

Gene expression signatures for human iPSC and ESC lines

In comprehensive glycome analysis with a high-density lectin microarray, we have previously shown that the recombinant N-terminal domain of the lectin BC2L-C from Burkholderia cenocepacia (rBC2LCN) binds exclusively to undifferentiated human induced pluripotent stem (iPS) cells and embryonic stem (E...

ORGANISM(S): Homo sapiens

2015-10-28 | E-GEOD-42099 | biostudies-arrayexpress

Structural O-Glycoform Heterogeneity of the SARS-CoV-2 Spike Protein Receptor-Binding Domain Revealed by Top-Down Mass Spectrometry

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) utilizes an extensively glycosylated surface spike (S) protein to mediate host cell entry and the S protein glycosylation plays key roles in altering viral binding/function and infectivity. However, the molecular structures and glycan hete...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2021-07-27 | MSV000087891 | MassIVE

A photoaffinity glycan-labeling approach to investigate immunoglobulin glycan-binding partners.

Not available

S-EPMC10627247 | biostudies-literature

The bulky and the sweet: How neutralizing antibodies and glycan receptors compete for virus binding.

Not available

S-EPMC5699497 | biostudies-literature

Fluorescent labeling agents change binding profiles of glycan-binding proteins.

Not available

S-EPMC3271732 | biostudies-literature

Glycan binding patterns of human rotavirus P[10] VP8* protein.