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ProteomicsMultiparameter functional diversity of human C2H2 zinc finger proteins
We have identified protein protein interactions of 118 C2H2 zinc finger proteins by AP-MS using GFP-tagged constructs in order to understand their role in transcription regulation.
ORGANISM(S): Homo sapiens (Human) 
2016-12-09 | PXD003431 | Pride
Protein protein interaction Regulation of transcription Transcription factors C2h2 zinc finger proteins 
GenomicsSMN and Symmetric Arginine Dimethylation of RNAP II CTD Control Termination
The C-terminal domain (CTD) of the RNA polymerase II (RNAPII) subunit POLR2A is a platform for modifications specifying the recruitment of factors that regulate transcription, mRNA processing, and chromatin remodeling. Here, we show that a CTD arginine residue (R1810 in human) that is conserved acr...
ORGANISM(S): Homo sapiens 
2015-12-31 | E-GEOD-73379 | biostudies-arrayexpress
Proteomics,MultiomicsGarg_Mediator_characterization_P108_VS4
This submission contains the mass spectrometry files for the manuscript by Garg et al. that describes the identification and functional characterization of the tetrahymena mediator complex. AP-MS experiments were performed from tetrahymena thermophila cells and MS files were acquired on 5600 TripleT...
ORGANISM(S): Tetrahymena Thermophila (ncbitaxon:5911) 
2019-02-26 | MSV000083486 | MassIVE
ProteomicsIdentification of the target proteins for compound 1
In this project, we used biotin-labeled compound 1 to pull down proteins in U2OS cell lysates with or without the competition of free compound 1, and then to identify the cellular binding of compound 1.
ORGANISM(S): Homo Sapiens 
2022-06-24 | PXD034927 |
TranscriptomicsTranscription profiling of yeast deletion strain and the isogenic wild type strainA
A deletion strain and the isogenic wild-type strain were compared to each other on our custom microarray.
ORGANISM(S): Saccharomyces cerevisiae 
2003-07-15 | E-MEXP-12 | biostudies-arrayexpress
ProteomicswholeCellExtract_L4-stage
L4 stage, whole protein extact, Heparin-IEX
ORGANISM(S): Caenorhabditis Elegans (c. Elegans) 
2016-12-31 | PAe005556 | PeptideAtlas
ProteomicsbeadsEnrichment_L1-L4
L1-L4 mixture, Beads enrichment, Heparin-IEX
ORGANISM(S): Caenorhabditis Elegans (c. Elegans) 
2016-12-31 | PAe005573 | PeptideAtlas
OtherAssessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation.
Data from ProteomeXchange, PXD ID: PXD002534. File: GR_130129_20_OT3_NT_L3MBTL2_FAB_31_G11_2_HEK293.mzXML. Published as part of Nat Methods. 2015 Jun 29 . From the Abstract: {{i}} ... We describe a mass spectrometry-based standard operating procedure for scoring immunoprecipitation antibody quality...
ORGANISM(S): Homo_sapiens_viruses, Human_female 
GPM32320016573 | GPMDB
Resource Reanalysis 
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