Gross S J SJ - OmicsDI

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Unknown (245)
Metabolomics (7)
Proteomics (4)
Transcriptomics (3)
Genomics (1)

Organisms

Homo sapiens (2)
Alphavirus (2)
Anemia (2)
Archaea (2)
Bacteria (2)
Betaherpesvirinae (2)
Borrelia (2)
Chlorella vulgaris (2)
Clostridium perfringens (2)
Dengue virus (2)
Eukaryota (2)
Hepatitis B virus (2)
Human alphaherpesvirus 1 (2)
Human betaherpesvirus 5 (2)
Influenza A virus (2)
Influenza C virus (2)
Japanese encephalitis virus group (2)
Kamptonema sp. (2)
Listeria monocytogenes (2)
Mammarenavirus (2)
Miscanthus x giganteus (2)
Mus musculus (2)
Mycobacterium tuberculosis (2)
Orthoflavivirus (2)
Panicum virgatum (2)
Pseudomonas aeruginosa (2)
Rattus (2)
Equus caballus (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Arabidopsis thaliana (1)

Repository

MetaboLights (7)
biostudies-arrayexpress (3)
pride (2)
EGA (1)
jPOST (1)
MassIVE (1)

Tissue

Heart (1)

Technology Type

Mass spectrometry (6)
Mass Spectrometry (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Illumina Genome Analyser II (1)
Exactive Plus (1)
MALDI MS (Imaging MS) (1)
LMJ-SSP/ESI MS (Imaging MS) (1)
Liquid Chromatography MS - positive (1)

Publication Date

2023 (5)
2018 (2)
2020 (2)
2014 (1)
2013 (1)
2012 (1)
2024 (1)
2016 (1)

CHEBI ID

CHEBI:28865 (3)
CHEBI:35038 (3)
CHEBI:16359 (3)
CHEBI:195271 (2)
CHEBI:143757 (2)
CHEBI:182784 (2)
CHEBI:173703 (2)
CHEBI:73858 (2)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:75342 (2)
CHEBI:64563 (2)
CHEBI:27997 (2)
CHEBI:34494 (2)
CHEBI:27432 (2)
CHEBI:80774 (2)
CHEBI:34687 (2)
CHEBI:181874 (1)
CHEBI:195266 (1)
CHEBI:195267 (1)
CHEBI:195269 (1)
CHEBI:75567 (1)
CHEBI:195270 (1)
CHEBI:195265 (1)
CHEBI:195272 (1)
CHEBI:181126 (1)
CHEBI:195264 (1)
CHEBI:190340 (1)
CHEBI:195263 (1)
CHEBI:44237 (1)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
Taurocholic acid (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Monoolein (2)
Elaidic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
9(10)-EpOME (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)
Hexanedioic acid, bis(2-ethylhexyl) ester (1)
9-Octadecenamide, (Z)- (1)
Ethanol, 2-(2-butoxyethoxy)- (1)
2-((4R)-4-((3R,5R,6S,9S,10R,13R,14S,17R)-3,6-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
Diphenylphosphate|Diphenyl hydrogen phosphate (1)
Methyl 2-(3-oxo-2-pentylcyclopentyl)acetate (1)

Study type

Transcription profiling by array (2)
RNA-seq of coding RNA (1)

Release Date

2018 (43)
2021 (29)
2013 (20)
2014 (17)
2015 (17)
2023 (15)
2022 (15)
2025 (12)
2024 (12)
2012 (9)
2011 (9)
2020 (8)
2017 (8)
2016 (8)
2026 (6)
2010 (6)
2009 (6)
2008 (5)
2019 (2)
2007 (1)

Lab affiliation

Dep. of Biology, University of Fribourg, Chemin du Musee 10, CH-1700 Fribourg (1)
UCSF (1)

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Walking, Gross Motor Development, and Brain Functional Connectivity in Infants and Toddlers.

Not available

S-EPMC6057546 | biostudies-literature

In plaque-mass spectrometry imaging of a bloom-forming alga during viral infection reveals a metabolic shift towards odd-chain fatty acid lipids (Imaging MS assays)

Tapping into the metabolic cross-talk between a host and its virus can reveal unique strategies employed during infection. Viral infection is a dynamic process that generates an evolving metabolic landscape. Gaining a continuous view into the infection process is highly challenging and is limited...

2018-11-29 | MTBLS769 | MetaboLights

Patterns of delay in early gross motor and expressive language milestone attainment in probands with genetic conditions versus idiopathic ASD from SFARI registries.

Not available

S-EPMC9939014 | biostudies-literature

Analysis of Unannotated Equine Transcripts Identified by mRNA Sequencing

Horse-specific genes are not readily identified from available equine EST/cDNA resources due to relatively limited coverage. In addition, equine gene sets predicted in silico by Ensembl and NCBI will not identify horse specific genes since they rely on homology-based projection of gene structure ann...

ORGANISM(S): Equus caballus

2013-07-30 | E-GEOD-46858 | biostudies-arrayexpress

Dynamic transcriptome structure of E. coli K-12 MG1655 across growth

High-resolution transcriptional profiling of E. coli across nine timepoints of growth in rich media (LB). Samples collected from lag phase to stationary phase of growth. High-resolution tiling array to detect conditional operon isoforms. Custom Agilent array designed to detect condition-specific tra...

ORGANISM(S): Escherichia coli str. K-12 substr. MG1655

2014-07-22 | E-GEOD-55879 | biostudies-arrayexpress

Subventricular zone/white matter microglia reconstitute the empty adult microglial niche in a dynamic wave.

Not available

S-EPMC8425950 | biostudies-literature

Gross tumour volume radiomics for prognostication of recurrence & death following radical radiotherapy for NSCLC.

Not available

S-EPMC9613990 | biostudies-literature

Holo omic investigation of host and microbe in broiler chicken (HoloFood Trial 1/2/3)

Chicken farming is critical for future food security, yet there is still a need for improving animal welfare and optimised feeding strategies. HoloFood will explore the interaction and impact of the microbiome together with the host (animal) in response to different feeding strategies already imp...

2023-06-13 | MTBLS6988 | MetaboLights

Association of Cardiovascular Health Through Young Adulthood With Genome-Wide DNA Methylation Patterns in Midlife: The CARDIA Study.

Not available

S-EPMC9348746 | biostudies-literature

Nonheme Fe^IV═O Complexes Supported by Four Pentadentate Ligands: Reactivity toward H- and O- Atom Transfer Processes.

Not available

S-EPMC10647104 | biostudies-literature